AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00384 ATGTCAGTCCTACTAGCTTCTTTCCGCAGTCATTTCTTCAAACACTTGGCGTGCACTTCCTTCTCGTCCATTCGCGCCACTCAAAATCTCTCCCCTGCTTCCGTTTTTAACCTAATTCGTCCCACCAGATATCACCCATCCACAAATTCGACACACTTCTTAAATTCGACATCAATTTCCACATCTTCTTCCACTCCCGATAATACTCCGACCACCGGTTCATACCTATCTGTAGACATCCAAAGCCATCAAAACGTCGCCGATATGTTTTCAGAAGCGCTGTTATGTTTTGGTGCTGTTTCAACAAGCGTGTTTGAACCGGATAGCTGCGAGTCTAACGATGAGATATCAATTGTTTCGATATTCTCTGTATCTCAAGATGTGCATCAAAGTATTGCATTGGCAGCTGATTCAATTGGCTTGAAAGAAACTCCTGTTTATAAAGTCACCACCGGTTATCAGTCCGATTGGATCGAAAATGTCCGGGAATCTTTCCATCCTATTGAAGTAACAGAAGGACTTTGGATTGTGCCTGAGTGGATAACTCCCCCTGACATTGAAGCAACGATTATAAGTCTAAACCCGGGGCTCGCTTTTGGAACCGGGGACCACCCGACAACCAAACTATGTCTACTATTATTGCAAGGATTAATCAAAGGCGGTGAAACAGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCAATTGCAGCACTAAAGTTTGGTGCAGCCTTAGCCAGTGGATTCGATATAGATCCTCAAGCGATAACAGCTGCACATCATAATGCTGCTTTGAACAACATTGGACCCGACATACTGCAACTGCAGGTTGTTCCTAGTAACATTAGTTCTATGTCAACCGACTCAACCGATCAATGGCAATGGGCTATGAAGGGTGATAGTGTAATAACAGACAATGCTATGGAAATTGTTAATGAGAAAGAGAAGTATGATGTGGTGGTTGCAAATATTCTTTTGAACCCGTTGCTAGATTTGGCTGATCATATTGTTTCTTACGCTAAACCTGGTGGTGTAGTCGGTCTCTCTGGTATTATCTTGGAGCAGGTACCTACGGTTGTGGACCGTTACTCGGATCTTTTGGAAGGGATTACTGTGTCACAGATTGATGACTGGGCTTGCATACGTGGCACGAAAAGGAAGACTGGGTAG 1170 43.85 MSVLLASFRSHFFKHLACTSFSSIRATQNLSPASVFNLIRPTRYHPSTNSTHFLNSTSISTSSSTPDNTPTTGSYLSVDIQSHQNVADMFSEALLCFGAVSTSVFEPDSCESNDEISIVSIFSVSQDVHQSIALAADSIGLKETPVYKVTTGYQSDWIENVRESFHPIEVTEGLWIVPEWITPPDIEATIISLNPGLAFGTGDHPTTKLCLLLLQGLIKGGETVLDYGTGSGILAIAALKFGAALASGFDIDPQAITAAHHNAALNNIGPDILQLQVVPSNISSMSTDSTDQWQWAMKGDSVITDNAMEIVNEKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTVVDRYSDLLEGITVSQIDDWACIRGTKRKTG 389
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00384 389 Pfam Ribosomal protein L11 methyltransferase (PrmA) 75 385 - -
Dapi7g00384 389 CDD AdoMet-MTases 223 346 - -
Dapi7g00384 389 Hamap Ribosomal protein L11 methyltransferase [prmA]. 71 385 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Dapi7g00384 389 Gene3D Vaccinia Virus protein VP39 164 389 IPR029063 -
Dapi7g00384 389 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 75 386 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Dapi7g00384 389 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 381 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00384 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
251688 Dapi7g00384 Dapi23g00412
387081 Dapi23g00412 Dapi7g00384
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:9169602 Dapi7g00384 Dapi-Chr7:8444511 wgd