AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00396 | ATGGCCGGCGTTCTCGAAACCCTAACAGTTCCTCGCACCTCCGGATTTCCCGCGGCTTCTCTAACTCCGATCGCCTCTTCTCATCTCTCTCTTCGCCGGAACTTTCTGCCGGAATCAAGAGGCTCAAAGTTAATGACCAATTCCTTCCTCCGCTCTTCTGGATCTGTTCGGTTGAGATCCAAATTCGGCCGCCGTGGTGGACGAATAGTATGCGAAGCACAGGAAGCAGCCGTACAAGTGCTTCCTGTGACTGATGGATCATGGCAATCACTGGTTCTGGATTCTAAGCTTCCTGTACTGGTTGAATTTTGGGCTCCATGGTGCGGGCCATGTCGCATGATCCACCCGATCATTGATGAGCTGGCGAAAGAATTCAATGGAAAGCTCAGTTGTTACAAGGTGAATACTGATGAGAGTCCTTCAATTGCTACCAAGTATGGTATAAGAAGCATCCCGACTGTCATCATCTTCAAAGATGGAGAGAAGAAAGATGCAGTTATTGGTGCTGTTCCGAAAACCACTCTGTCTACCTGCATTGAGAAGTTTCTGTAA | 552 | 48.55 | MAGVLETLTVPRTSGFPAASLTPIASSHLSLRRNFLPESRGSKLMTNSFLRSSGSVRLRSKFGRRGGRIVCEAQEAAVQVLPVTDGSWQSLVLDSKLPVLVEFWAPWCGPCRMIHPIIDELAKEFNGKLSCYKVNTDESPSIATKYGIRSIPTVIIFKDGEKKDAVIGAVPKTTLSTCIEKFL | 183 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00396 | 183 | CDD | TRX-family | 87 | 175 | - | - | |
| Dapi7g00396 | 183 | PRINTS | Thioredoxin family signature | 147 | 158 | - | - | |
| Dapi7g00396 | 183 | PRINTS | Thioredoxin family signature | 99 | 107 | - | - | |
| Dapi7g00396 | 183 | PRINTS | Thioredoxin family signature | 107 | 116 | - | - | |
| Dapi7g00396 | 183 | NCBIfam | thioredoxin | 84 | 182 | IPR005746 | GO:0015035(InterPro) | |
| Dapi7g00396 | 183 | SUPERFAMILY | Thioredoxin-like | 73 | 183 | IPR036249 | - | |
| Dapi7g00396 | 183 | PANTHER | GEO12009P1 | 56 | 183 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Dapi7g00396 | 183 | ProSiteProfiles | Thioredoxin domain profile. | 70 | 183 | IPR013766 | - | |
| Dapi7g00396 | 183 | Pfam | Thioredoxin | 80 | 180 | IPR013766 | - | |
| Dapi7g00396 | 183 | ProSitePatterns | Thioredoxin family active site. | 100 | 118 | IPR017937 | - | |
| Dapi7g00396 | 183 | Gene3D | Glutaredoxin | 79 | 183 | - | - | |
| Dapi7g00396 | 183 | FunFam | Thioredoxin | 74 | 183 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00396 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 74130 | Dapi12g01421 | Dapi7g00396 | |
| 76559 | Dapi18g00917 | Dapi7g00396 | |
| 251697 | Dapi7g00396 | Dapi23g00424 | |
| 387090 | Dapi23g00424 | Dapi7g00396 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr29:110073981 | Dapi7g00396 | Dapi-Chr7:8630663 | dispersed | |
| Dapi | Dapi-Chr31:107641277 | Dapi7g00396 | Dapi-Chr7:8630663 | dispersed | |
| Dapi | Dapi-Chr32:7682718 | Dapi7g00396 | Dapi-Chr7:8630663 | dispersed | |
| Dapi | Dapi-Chr6:13290243 | Dapi7g00396 | Dapi-Chr7:8630663 | dispersed | |
| Dapi | Dapi-Chr7:1090580 | Dapi7g00396 | Dapi-Chr7:8630663 | dispersed | |
| Dapi | Dapi-Chr7:8630663 | Dapi26g02353 | Dapi-Chr26:106286552 | dispersed | |
| Dapi | Dapi-Chr12:97925423 | Dapi7g00396 | Dapi-Chr7:8630663 | wgd | |
| Dapi | Dapi-Chr23:9419824 | Dapi7g00396 | Dapi-Chr7:8630663 | wgd |