AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00418 ATGGCTCTCTCTCTCAAACTCGCCGTCCTTTCCGCTTCCGTCTTCTCCACCGCCATCCTCTTCAACCTTCTATCACCCTTCTTCATCAACTTCACAATCTCCGACCTTCCTATTATCTGGACCTCCCTCACCACCTGCCTCAAACCGCCTTACCTTTATGTTCTTATCAATTGTATTATTATCACCATCGTCGCTTCCTCTCGGTTGCACTCCAAGCACCACGCTTATAATTATCATGAATATTCTCGACTCTCAACTTTCCCTGTACCGCCTCATGAACCGGTCAAACTACCGCTGGTTCATGGCGGTGTGGTGGACAACGAACCGGTGGATATTGTTGATGAAACCCTAGATGATCAAGATATGAAGATACCGAAGGAATTAGCTTATGAAGAAATTATCAAGAAGAATAAGGTTAATAATAAATCTGTAATCTCGATGTCGGTTTCAGATATTAATCAAGTCGGTTTATTTTCTCCGGTAGAGAAACCACCGGCTTCCATCAGATTTAGCAACCGGAAAGCTGCAAAAGCCGTTCCCGAAGGCGGTAGGCCGTTGGGAGTTGCGAAACCAAAGCGGCAAGACACGCTGGAGAGCACGTGGAAGACAATAACAGAAGGTCGGTCCGTGCCGTTAACGAGACACCTACGTAAATCTGACACGTGGGAGACTCACGGTCAAGGCCGTAATAATCGCACCTCCAATGAGTTCCTTACTGAAAATGATTATTCGGAAAGGATGACAAAATCAGAAACGTTTGACGTGAACCGGGGGAAACCGGTGAAACCACCGGTCGGGCCGCCGTCAAAACTAAACCGGTCAGGGGGGTTAAAGAAGGAACCGTCGTTGGGGCAGGAGGAGTTGAACCGGAAAGTGGAAGCGTTTATTAAGAAGTTTAATGAGGATATGAGATTACAAAGACAGGAATCATTGAATCAGTATATGGAGATGATTAATCGTGGGGCACATTAA 972 46.3 MALSLKLAVLSASVFSTAILFNLLSPFFINFTISDLPIIWTSLTTCLKPPYLYVLINCIIITIVASSRLHSKHHAYNYHEYSRLSTFPVPPHEPVKLPLVHGGVVDNEPVDIVDETLDDQDMKIPKELAYEEIIKKNKVNNKSVISMSVSDINQVGLFSPVEKPPASIRFSNRKAAKAVPEGGRPLGVAKPKRQDTLESTWKTITEGRSVPLTRHLRKSDTWETHGQGRNNRTSNEFLTENDYSERMTKSETFDVNRGKPVKPPVGPPSKLNRSGGLKKEPSLGQEELNRKVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH 323
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00418 323 MobiDBLite consensus disorder prediction 226 241 - -
Dapi7g00418 323 MobiDBLite consensus disorder prediction 242 256 - -
Dapi7g00418 323 Pfam Domain of unknown function (DUF4408) 37 69 IPR025520 -
Dapi7g00418 323 Pfam Cotton fibre expressed protein 285 320 IPR008480 -
Dapi7g00418 323 PANTHER COTTON FIBER (DUF761) 4 321 - -
Dapi7g00418 323 MobiDBLite consensus disorder prediction 217 286 - -
Dapi7g00418 323 MobiDBLite consensus disorder prediction 172 195 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00418 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251712 Dapi7g00418 Dapi23g00445
387105 Dapi23g00445 Dapi7g00418
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr21:113276489 Dapi7g00418 Dapi-Chr7:9111809 dispersed
Dapi Dapi-Chr5:107262439 Dapi7g00418 Dapi-Chr7:9111809 dispersed
Dapi Dapi-Chr23:9808420 Dapi7g00418 Dapi-Chr7:9111809 wgd
Dapi Dapi-Chr7:9111809 Dapi7g03211 Dapi-Chr7:121641222 wgd