AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00484 ATGGATGATATGTTTGTGGCAATCCTTTCAATGCTTCTTCTTGTTGCATTGATTCCGCTTTACCTTTGGAAACGCCGTCAGGTTCCGCAGTCTCGTGATGAACACGAAGAACAACCACAGATTCAGCAGAGAGAAGCTGTTGTAAGACCTACCGGTGCTCGGAGTCGGATGCGCAGAAGGCATACTTCAGCTGCCAGCACATCTTCATCTTCTGCTCCACAAACTGTTGAAGAAACTGAGGATGGAAGTGATGAAGAAGCTGTTGAAGGGGAATATTATAATGCAAAAACATCAAAGAAGAAAGGAAGGAAGAAAGAGGAACGCCAAGCACAACGCCAGGCTGACGAGGCTGCAAGGGAGTCGAGAAATACAAAACAGGATTGTTATGCAGAAATGCGCAGGAGGAAAGATGAGGAACACGAAGCAAAAGAACGGATGCTGGAAGAAGAAGCCGAAGCTCAAAAGGCCAAAGAGGAGGAAGCAGCAGCTTTAGAGTTTGATAAATGGAAAGGAGAATTTTCAGTAGATGCTGAAGGTACCACAGAAAATGAAGCTCAAGATGGAACACAGGGTTTGCTTTTTGATTTTGTGGAGTACATTAAGAAACAGAAATGTGTTCCGTTGGAAGATCTTGCTGCAGAATTTAAGCTAAGGACTCAAGACTGTATCAATCGAATCACCTCATTGGAAGATATGGGGAGATTGTCAGGTGTGATGGACGATAGAGGAAAATACATATACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAGCGCGAAGGTCGGGTCAGCATTGCACATCTAGCAAGCCAGTCAAATCAGTTCATAGATTTGGAACCCAAACCACAGTTTGTGGAGGATTTTGGCACTGCAGATGAGATTACAGTTGCTTGA 903 44.08 MDDMFVAILSMLLLVALIPLYLWKRRQVPQSRDEHEEQPQIQQREAVVRPTGARSRMRRRHTSAASTSSSSAPQTVEETEDGSDEEAVEGEYYNAKTSKKKGRKKEERQAQRQADEAARESRNTKQDCYAEMRRRKDEEHEAKERMLEEEAEAQKAKEEEAAALEFDKWKGEFSVDAEGTTENEAQDGTQGLLFDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKPQFVEDFGTADEITVA 300
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00484 300 Coils Coil 129 163 - -
Dapi7g00484 300 MobiDBLite consensus disorder prediction 31 153 - -
Dapi7g00484 300 SMART DDRGK-2 95 280 IPR019153 -
Dapi7g00484 300 FunFam DDRGK domain-containing protein 1 191 248 - -
Dapi7g00484 300 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 74 292 IPR050899 -
Dapi7g00484 300 Pfam DDRGK domain 95 280 IPR019153 -
Dapi7g00484 300 SUPERFAMILY Winged helix DNA-binding domain 187 256 IPR036390 -
Dapi7g00484 300 Gene3D - 191 248 IPR036388 -
Dapi7g00484 300 MobiDBLite consensus disorder prediction 107 153 - -
Dapi7g00484 300 MobiDBLite consensus disorder prediction 62 77 - -
Dapi7g00484 300 Coils Coil 100 127 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00484 K23344 DDRGK domain-containing protein 1
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251742 Dapi7g00484 Dapi23g00502
387135 Dapi23g00502 Dapi7g00484
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2035316 Dapi Dapi23g00502 Dapi-Chr23:11279793 Dapi7g00484 Dapi-Chr7:10671245