AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00519 ATGCATGATTTTTGCTTTACAATCCCGTACGGGATGATAGTGTTCTGCGGTGGGATTATTGGATTTGCAAGAAAAGGAAGCACCACATCGTTGGCTGGGGGTGTGGGCACTGGATTACTGCTTTTCCTTGCTTCCTATCTCACTCTCAATGCCTTCCACAAGCGAAAGAACTCATGGTTTGGGTTGATTCTTGAAACTGTTTGTGCTGCTGCACTTACATGGTTTATGGGACAGCGATACACAGAAACTGCTAAAATCATGCCTGCTGGTGTTGTTGCTGTTATCAGTGGATTGATGACAGCATTTTATCTGTACAAGATCGCCACTGGCGGCAACCATTTTCCCGCAAAAACTGAATGA 360 45.0 MHDFCFTIPYGMIVFCGGIIGFARKGSTTSLAGGVGTGLLLFLASYLTLNAFHKRKNSWFGLILETVCAAALTWFMGQRYTETAKIMPAGVVAVISGLMTAFYLYKIATGGNHFPAKTE 119
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00519 119 Gene3D - 1 111 IPR044890 -
Dapi7g00519 119 Pfam Transmembrane proteins 14C 6 103 IPR005349 GO:0016020(InterPro)
Dapi7g00519 119 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 108 IPR005349 GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00519 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251766 Dapi7g00519 Dapi23g00533
387159 Dapi23g00533 Dapi7g00519
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1926416 Dapi Dapi27g01028 Dapi-Chr27:28446630 Dapi7g00519 Dapi-Chr7:11272403
1941612 Dapi Dapi4g02479 Dapi-Chr4:133119333 Dapi7g00519 Dapi-Chr7:11272403
2035334 Dapi Dapi23g00533 Dapi-Chr23:12001355 Dapi7g00519 Dapi-Chr7:11272403