AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00529 ATGGACCCGGTGAACCAAGAGGTAAGGCCCGATGAGACACTAACTGGTATTGACACGCGAAAACGAGGCCGCCCACGAAAGGATCCAGGTGAGAAACGGGCCCAAAGAGCCCGTTCACATGCGGATGTTCGCCCGCCACCTGGTTTTGCACCACTGCCCAACTGCACTCCTCTAGTTGACCCGATAAATGATCCAACTCAAGTTATGGTTGGACAGACTGTAACCGGTGTTGTTCAGGGAACTTTTGATGCGGGTTACTTGCTCGCTGTTAGGATTGGGAACTCAAACATTACCCTAACGGGTGCAGTTTTCAAACCGGGCCAAGCTGCACCGTTGACACCTGAAAATGATGTGGCACCTCATGTTGAAATGATCAAACGAACCGAAATTCCGATTCCAACAGAAGTCCAGCCCCCCAAACATAGGCGTAAACGAAGATCAAAAGAGAAAAGTATGCAACTTGTTACTTATGGTGAAAACGGGTCAGACGCTGTGGATATGAATCCACCACCTAAAAGCAACCGCGCGTTACCCCCCTCGGCCGAGGTTAGCGGGAAAGCCACCTTTGTCCCTGTCGTTCTTCGACCTATTAACCCATCAAACAGTTTATCCAACAACCAACCTGCACCTCATTTGCGGGCCTCACTAGGCAAGCGGGTGCACTCGGTTCTGCCATTGGCGGTTTACCCACCAAAAGTGTCAGCAAGTAAACCGTCTGATTCTCAAAGTAGCTCACAGTTTACTGTTACACCCCCCGGGTTTGGAAATGAGAATGCTCCTTTTAAAAATGCAGAAGGGAGTAAAACAGTAAAATCAAGTAATGTGCAAGATGGAGTTGTGAAAACTGAATCAGATATCGGTGATATGAATGAACCTCTTTTCGTTGAACCCCTGCAAACTCGACACACAGTTCCGCATTTCCAGCCTCCACCAGTATTTGGAGGTGGGATGCATAGTGCTACCGGGAGAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATACGGGTGATGACCAGGCAAGGAGGATGTAA 1032 49.03 MDPVNQEVRPDETLTGIDTRKRGRPRKDPGEKRAQRARSHADVRPPPGFAPLPNCTPLVDPINDPTQVMVGQTVTGVVQGTFDAGYLLAVRIGNSNITLTGAVFKPGQAAPLTPENDVAPHVEMIKRTEIPIPTEVQPPKHRRKRRSKEKSMQLVTYGENGSDAVDMNPPPKSNRALPPSAEVSGKATFVPVVLRPINPSNSLSNNQPAPHLRASLGKRVHSVLPLAVYPPKVSASKPSDSQSSSQFTVTPPGFGNENAPFKNAEGSKTVKSSNVQDGVVKTESDIGDMNEPLFVEPLQTRHTVPHFQPPPVFGGGMHSATGRMTELLQAVQQNTGDDQARRM 343
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00529 343 MobiDBLite consensus disorder prediction 235 253 - -
Dapi7g00529 343 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 336 IPR045881 -
Dapi7g00529 343 MobiDBLite consensus disorder prediction 160 180 - -
Dapi7g00529 343 MobiDBLite consensus disorder prediction 13 40 - -
Dapi7g00529 343 MobiDBLite consensus disorder prediction 1 54 - -
Dapi7g00529 343 MobiDBLite consensus disorder prediction 232 273 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00529 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251773 Dapi7g00529 Dapi23g00546
387166 Dapi23g00546 Dapi7g00529
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1937904 Dapi Dapi32g01984 Dapi-Chr32:68787312 Dapi7g00529 Dapi-Chr7:11426196
1942735 Dapi Dapi5g01508 Dapi-Chr5:103757003 Dapi7g00529 Dapi-Chr7:11426196
2035341 Dapi Dapi23g00546 Dapi-Chr23:12237393 Dapi7g00529 Dapi-Chr7:11426196