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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00549 ATGTTGCTTCACAGTTGCAGCTTTTCTTCTACCTCTTGTCGATTATTACAGTCCACAAGTCAAACCGTCAGAATCAGTTACTCAAGCAGCAGACGAAATCTCAAAGTTTGTTCGACGCTTGCGTCTCTCAGATTTGGAACAGATGTAATCGTTGAAATAGCTCACAATAAGGCGCTGATAGCAGCGACACTATGTGCAGCAGCTGGACAATTAGCAAAACCTTTTACTGCGTCCATTTTGTATCAAAGAGAATTCGATCCAAAAGCTGCAATTTCAGCTGGAGGGTTTCCTTCAACCCATTCTTCTGCTGCTGTGGCTACTGCAATGTCCATCGGTCTGGAAAGGGGTTTCTCGGATTCAATTTTTGGATTAGCAGTTGTCTATGCTGCTCTTACCATGTATGATGCACAGGGTGTTAGAAGGGAAGTGGGAGTTCATGCAAGAACATTAAATAAAGTATTAACCAAAAACAAACCGAACACATATGAGTCATCTGATCGCAACTGTTTGATTGAATCTTCATCCAAAAAACTGCTGTCAAGTTCAGAGTCAGACAACAATTCTCTCATGTTGGAAAAGAGTGTAAGCGCGTTAACAGATGATACCGAAACAGGATCAGAGAATAATGGTCCAATTTCTGGTCAACTGAAAGAGTCAATAGGTCACACTGAAGTTGAAGTAGCAGCAGGTGCTTTGTTGGGAGTACTCGCAAGCTTAGCAGTCTACTCTATATGA 735 41.9 MLLHSCSFSSTSCRLLQSTSQTVRISYSSSRRNLKVCSTLASLRFGTDVIVEIAHNKALIAATLCAAAGQLAKPFTASILYQREFDPKAAISAGGFPSTHSSAAVATAMSIGLERGFSDSIFGLAVVYAALTMYDAQGVRREVGVHARTLNKVLTKNKPNTYESSDRNCLIESSSKKLLSSSESDNNSLMLEKSVSALTDDTETGSENNGPISGQLKESIGHTEVEVAAGALLGVLASLAVYSI 244
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00549 244 CDD PAP2-like 58 146 - -
Dapi7g00549 244 Pfam Divergent PAP2 family 55 236 IPR003832 -
Dapi7g00549 244 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 46 243 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00549 K09775 uncharacterized protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
251787 Dapi7g00549 Dapi23g00569
387180 Dapi23g00569 Dapi7g00549
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:12638432 Dapi7g00549 Dapi-Chr7:11886125 wgd