Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi7g00568 | ATGACCATTTCTTCACTTGTCGCCTCTCGCATCTTGATCTCCTCCACCGGATTCTTCACTGATATTCATATAATATGGGTGACAGTCAGTACTCTTTCTCCCTTACTACTTTCAGAGCTGATTAGTCCTTCTGGAAAGCTTGTTCAGATTGAACATGCCCTAACAGCTGTTGGCTCTGGCCAAACTTCATTGGGGATTAAAGCTTCTAATGGTGTCGTAATTGCAACCGAAAAGAAGCTCCCATCCATTTTAGTCGACGAGACATCGGTGCAAAAGATCCAGATTTTGACTCCTAATATCGGAGTTGTTTACAGTGGGATGGGGCCCGATTCACGAGTTTTGGTCAGAAAGAGTAGGAAGCAGGCAGAGCAATACAATCTGCTATACAAAGAACCAATCCCTGTTACGCAACTTGTAAGGGAAACTGCTGCTGTTATGCAAGAATTTACTCAATCAGGTGGTGTAAGGCCTTTTGGTGTTTCACTCCTTGTTGCTGGTTACGATGACAAAGGTCCCCAACTTTATCAGGTGGATCCCTCAGGTTCATATTTCTCCTGGAAGGCTTCAGCCATGGGAAAGAATGTATCCAATGCAAAGACATTTCTTGAAAAGAGGTACACTGATGATATGGAGCTTGAAGATGCGATACACACAGCTATTTTAACATTGAAGGAGGGATTTGAAGGACAAATATCTGGGAAAAACATCGAGATTGGTGTTATCGAGGCTGACAGAACATTCAGAGTCCTGACTGCAGCTCAAATTGAAGACTATCTTCAAGAGGTGGAATAG | 792 | 43.18 | MTISSLVASRILISSTGFFTDIHIIWVTVSTLSPLLLSELISPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDETSVQKIQILTPNIGVVYSGMGPDSRVLVRKSRKQAEQYNLLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELEDAIHTAILTLKEGFEGQISGKNIEIGVIEADRTFRVLTAAQIEDYLQEVE | 263 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi7g00568 | 263 | CDD | proteasome-alpha-type-2 | 42 | 259 | - | - | |
| Dapi7g00568 | 263 | FunFam | Proteasome subunit alpha type | 35 | 263 | - | - | |
| Dapi7g00568 | 263 | ProSiteProfiles | Proteasome alpha-type subunit profile. | 49 | 259 | IPR023332 | - | |
| Dapi7g00568 | 263 | Pfam | Proteasome subunit | 59 | 241 | IPR001353 | GO:0005839(InterPro)|GO:0051603(InterPro) | |
| Dapi7g00568 | 263 | PANTHER | PROTEASOME SUBUNIT ALPHA-BETA | 41 | 260 | IPR050115 | GO:0010498(PANTHER)|GO:0019773(PANTHER) | |
| Dapi7g00568 | 263 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 41 | 262 | IPR029055 | - | |
| Dapi7g00568 | 263 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 38 | 263 | IPR029055 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi7g00568 | K02726 | 20S proteasome subunit alpha 2 [EC:3.4.25.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251796 | Dapi7g00568 | Dapi23g00587 | |
| 387189 | Dapi23g00587 | Dapi7g00568 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr7:12091453 | Dapi7g01532 | Dapi-Chr7:67503907 | dispersed | |
| Dapi | Dapi-Chr23:12910598 | Dapi7g00568 | Dapi-Chr7:12091453 | wgd |