AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi7g00576 ATGTCGGAGCACAGCACAGTTAATAGTACGGCTACCGGACCGGATTTTAACCTACCGGATGAAATCCTATCGGTGATCCCTACGGATCCTTACGACCAGCTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTCGCATCTCGCGTTTCGAAACTGGAGTCAGAGGCAGGTGTTTTGAGGCATAAGTTGAGCGAGAAAGATCGAGTAATAATGGAGCTTGAAGAGAAGGTATCTGAGCTTCAGCAGACGTGTCATAATGTTCAGATGCGGTTGCAGCTTACGGTTGAGGATAATAGGAAACTTGCGGAGGAGAGAGATTCGTTGGCTGTGACTGCTAAGAAATTAGGGCGCGATTTAGCTAAGCTGGAGGCGTTCAAGCGACAATTAATGCAGTCATTGAACGACAATGATTCAACTCAGGCAGCAACTGTAGATATAGGCACCTATGACCAATCTGGTCCCAAAGCTTATCCGGTTAAAGAAGAGGAGACAAATGGCTATAGAAGGCACCATTCTTACAGTGGCTCTATTGATAGTGGAAACATACATGATGACGCCTCAAAGCTTGCTGGTCAAAGGTTTTCTGTGACACCGTATATCAGCACACGTGTAACTCCAACTGCAACTCCCAAAACAGTCTCTGCAAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGTGCCACATCCCCAACAAAAAATCAATATGATGCTCGTGCCACAATGTCATCATGGTACCCATCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGTGCCCCCTATACCAGGGCGCGCTGCTAAGATTGATGGAAAAGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAATTCAGTGCTTTCTTAGCAAATATAAAGGAGTTAAATGCTCAAAAGCAATCTCGTGAGGAAACTTTGAGGAAGGCAGAAGAAATATTTGGGTCTGATAACAAGGATCTTTATCTAGCATTTCAAGCTCTACTAAATCGCAACAAACAATGA 1011 45.2 MSEHSTVNSTATGPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAGVLRHKLSEKDRVIMELEEKVSELQQTCHNVQMRLQLTVEDNRKLAEERDSLAVTAKKLGRDLAKLEAFKRQLMQSLNDNDSTQAATVDIGTYDQSGPKAYPVKEEETNGYRRHHSYSGSIDSGNIHDDASKLAGQRFSVTPYISTRVTPTATPKTVSASVSPRRYSASGATSPTKNQYDARATMSSWYPSSQQSSAGNSPPRVPPIPGRAAKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNKDLYLAFQALLNRNKQ 336
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi7g00576 336 Coils Coil 295 315 - -
Dapi7g00576 336 MobiDBLite consensus disorder prediction 206 256 - -
Dapi7g00576 336 MobiDBLite consensus disorder prediction 152 180 - -
Dapi7g00576 336 MobiDBLite consensus disorder prediction 206 267 - -
Dapi7g00576 336 PANTHER OS03G0659800 PROTEIN 15 334 - -
Dapi7g00576 336 Coils Coil 63 90 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi7g00576 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
251800 Dapi7g00576 Dapi23g00596
387193 Dapi23g00596 Dapi7g00576
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr7:12304179 Dapi9g01730 Dapi-Chr9:71232428 dispersed
Dapi Dapi-Chr7:12304179 Dapi23g00596 Dapi-Chr23:13129840 transposed