AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan1g02743 ATGGAAGCAGAAAAATTGAAGTCTGAAACGATGGTGATTGAAGAATGGAGCGGAACTTCTTCAAACAAACTTTCATTAACCGCCGTTATATCTGTGTCATCTTCTTTCTCTGTAAAAACTCACGGTAACCGATTCAATCTTTTCACCAGAAGATTCCTAGAAGCTTTTGTTCCTGAGGGGTTTCCCAGCAGCGTGACCCCGGATTACACCCCTTTCCAGACATGGGATTTGTTGCAGGGACTTTCAACCTACATAAGGATGATGCTCTCAACACAAGCTCTTTTAAGTGCTATAGGAGTTGGTGAAAAATCAGCTACTGTAATTGGCGCTACCTTCCAGTGGTTTTTGAGGGATTTAACTGGAATGCTTGGAGGCGTCATGTTCACATTCTATCAGGGCTCAAACCTAGACAGCAATGCAAAAATGTGGCGTTTGGTTGCAGATCTCATGAATGATCTTGGGATGCTGATGGACCTTCTTTCTCCATTGTTTCCTTCAGCCTTTGTATTCATTGTATGCTTAGGGAGCTTGTCAAGATCTTTCACTGGTGTTGCCAGTGGAGCAACTAGAGCTGCTTTGACCCAGCATTTTGCACTTCAGAATAACGCGGCAGATATATCTGCAAAGGAAGGAAGCCAGGAGACGGTTGCGACAATGATTGGAATGGCTTTAGGAATGCTTCTTGCGCACGTTACAATGGGACACTCAACAATGATATGGTTATGTTTTCTCTCCCTCACCATGTTCCACATGTATGCTAATTATAAAGCTGTTAGATGCCTTAATTTAACTACATTAAACTGTGAAAGAAGCTCAATTCTTCTGCTACATTTCATGGAGACTAGCCAAGTTCTCTCCCCGAGAGAGGTCTCAATTATGGAGCATGTCTTACCTTTATGGATCAGTTCTTGGAACTCAAAGAATATCAAGTCTTTGTATACACGAGTACGCTTAGGTGTGAGGGTTTCCTCACTAAACAGCCTGGAAATATGCAAGCGTTCATTTCTAAGTTCAGACTTCAACTCAACTGCATGA 1035 42.42 MEAEKLKSETMVIEEWSGTSSNKLSLTAVISVSSSFSVKTHGNRFNLFTRRFLEAFVPEGFPSSVTPDYTPFQTWDLLQGLSTYIRMMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVMFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMIGMALGMLLAHVTMGHSTMIWLCFLSLTMFHMYANYKAVRCLNLTTLNCERSSILLLHFMETSQVLSPREVSIMEHVLPLWISSWNSKNIKSLYTRVRLGVRVSSLNSLEICKRSFLSSDFNSTA 344
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan1g02743 344 PANTHER RUS1 FAMILY PROTEIN C16ORF58 11 326 IPR006968 -
Ecan1g02743 344 Pfam Vitamin B6 photo-protection and homoeostasis 48 281 IPR054549 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan1g02743 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2101243 Ecan Ecan1g02743 Ecan-Chr1:41767115 Ecan1g02745 Ecan-Chr1:41767115
2124681 Ecan Ecan1g02742 Ecan-Chr1:41767115 Ecan1g02743 Ecan-Chr1:41767115
2124682 Ecan Ecan1g02743 Ecan-Chr1:41767115 Ecan1g02744 Ecan-Chr1:41767115