AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan1g02772 ATGGGAACTGAAGTACACTGTAAAAGCTCTTTTGAAAGGTACTCCATGAGGGACGCAAATGAGGATTCTAATAGTAGCAGCTGGCCTGTCTTTTACGGAGACAAACCTTCCGCTAACAGCCATTATTACAACGGGTTCATACCAAGGACCATTTCAGATACTTACCCGGGGTGCAATAAAGATGCATTAAAGGCAAGAATGCTTGAACATGAAGCCATCTTTAAGAATCAGGTTTATGAACTTCATCGTCTTTATAGAAGACAAAGAGACATGATGGAAGAAATCAAAAGGAAGGAGTATCATAAGCATAGGATTTCTATCGACACATCATCATCTTCAAGTCTATTACCATCACAAAAACCGTATGAAGATGGTCACAAATGGCAAATACCGAGCTTCCCATTGACCAACTCCTGTGCTGCTAGACCATCAATTTTCGGAGCAGATATTAGTAATTCTCCTTTAAGTTGTTCTAAAGGGAATAATAATAGTTTCAAAGATTGTGAAATCTTGGAGCCCAGACCTTCAAAAGTAAGAAAAAAGTTATTTGATCTTGAACTCCCACCTGATGACATTGACCAAGAAGAACCGGAGGATATTCAATATAAGCAGGCATCCGAAGAATCGAGTTATAAAGACGCTTCACTCGGTCCATGTTTTAGAGGGTCCAATGGATTGGCAGATCTTAATGAACCCATCAATGTTGAAGAAACGGTGGTGGCTCACAGGTCTGTTGATGGTATGGGTCCTTCGGCTAACCCGAAAGGATCACAGTTTCTTGGCCCAACCAATGAGCCCTTTGAAAAGTCTCATAGTGGACGACCTGGTGGCACATTTAACCCTCTATTGCTAGAGGGAAAAGGCAATGGAAGAGATTGGTTATCCAATATGCGTGAAGCAGGGAATAATAGAAGCAGTATGAACATTACACCTGGAACTTATCCCGAGATTTCTACCAGAATTCAGGATCATTCCCGATTTAACCAAACCCCTTTGCCCTTTCCCACTTCACGTACATCGAATCCATACCCATACACGAATTCCCCAGATTTTGGAAACACACGGGGAAAACCGAATGGTACATTTACTCATAAGTTGACCTCCTTTCAGAAACAACCGTCTTTTCTATCATCTCAACAGAACCATGTGGTTTTTGGAGACAAGTTGCGTACAAATGGATGCTTTACACCAAATGGATTATTTCATGGGTCATCATCCGGGTCAAAAGATCCATGTAGTCGCTTGCCTTCTGGTGGGTTTGATAATCGGAATTTTAATAATCTTTCCGATAGGTCTCAAAATTTCTTCAAGGGTTCCAACTTTATAGATTTGACTGATACTACCAAAGGCACTGATCTAAATAGTGACGTCAATGGTGCAAGAAAATGTGATCAACCAGCGTTACCATGGCTTCAAGCTAAACCAGCTATCTGTAAAAATGATTCCCGTTTTGATGATCACGGGGAAAAAGGTGCTACTTTGGGTAATAATGATTCCCGCTATGACGATCGTGGGGAAAAAGGTGCTACATTGGGTAATAATGGAAAGATTCTTGGGTTTCCAGTTTTTGGGAATTCTTGTGTTACTAAAAACGATTCTTCATCACTTCTCTCTACTTCAGCATCTCTTGGTTGCCATGGAAATGGACAAATAAAAACAGAAATGGAACACAAAGGATTTGACATCAATGTCGCTTACGTGGAGACTTGTAATACACAGAAAGAAACAGATACAGAAATCGAGGTGGTCAAGAATCATTTTGACCTGAATTCATGTTTGACTGAAGAGGAAGATGTTCTAGTACCCGAATCTGTTAAAAGCTCGAGCGATAATGTAAAGAAGATAACACTGGATATTGATTTAGAAGCTCCTGCTGTCCCAGAGGTTGAAGAAGAGGAAGCCATTGATGTGGTCAAGAAAATTGATGATTGTAATGATGAATCACTTGCCAAGGTGGCAGCTGAAGCAATAGTTGCGATTACTGGGATGTCCAGTCAGCAAGATCAAGCTGGCTCCTCCTCTGAGGTGGCGGTTTGCTCAGATGATAATGACCGTCTCCTGTTACTAGTTGATGTAATCGAAAATGCGGGGGCTGTTTCAAAGGAGTTAGATGAATATGAGGAGATGACTTTGAAACTAGAGCCGACTAAAGAAGAAGATTACATGCCAAAGCCTTTGGCTCCTGATTTTCGGGAGCCCGAAGAAGCGGGCCCGATGGCTGGACCTACCCGACCAAGAAGAGGTCAAGCTAGACGTGGTAGGCCCAGGAGGGACTTCCAAAGGGACATCTTTCCGGGGCTGGTTTCTCTTTCGAGGCATGAGGTAACCGAAGATCTTCAAATATTCGGTGGATTAATGAAAGCCACAGGGCATTCATGGAATGTAGGACTGACGAGGAGGAACGGAACCAGGGGAAGGCGGAAGTCACTGGCGGTGGCAGTCCAACCACCTCTTGCCGCCACTCCGTCAGCACCACCGTCGCCGCCGCCGCTGCCACCTCCATTGTCGGAGGTAGTGGGGTTAGAGGAAAGAAGCCTAACAGGGTGGGGAAAGACAACTAGACGTCCCCGGAGACAACGGTGTGCTGCAGGTAGTTCTGTGGCAGTCCCGTTAACGTAA 2619 43.8 MGTEVHCKSSFERYSMRDANEDSNSSSWPVFYGDKPSANSHYYNGFIPRTISDTYPGCNKDALKARMLEHEAIFKNQVYELHRLYRRQRDMMEEIKRKEYHKHRISIDTSSSSSLLPSQKPYEDGHKWQIPSFPLTNSCAARPSIFGADISNSPLSCSKGNNNSFKDCEILEPRPSKVRKKLFDLELPPDDIDQEEPEDIQYKQASEESSYKDASLGPCFRGSNGLADLNEPINVEETVVAHRSVDGMGPSANPKGSQFLGPTNEPFEKSHSGRPGGTFNPLLLEGKGNGRDWLSNMREAGNNRSSMNITPGTYPEISTRIQDHSRFNQTPLPFPTSRTSNPYPYTNSPDFGNTRGKPNGTFTHKLTSFQKQPSFLSSQQNHVVFGDKLRTNGCFTPNGLFHGSSSGSKDPCSRLPSGGFDNRNFNNLSDRSQNFFKGSNFIDLTDTTKGTDLNSDVNGARKCDQPALPWLQAKPAICKNDSRFDDHGEKGATLGNNDSRYDDRGEKGATLGNNGKILGFPVFGNSCVTKNDSSSLLSTSASLGCHGNGQIKTEMEHKGFDINVAYVETCNTQKETDTEIEVVKNHFDLNSCLTEEEDVLVPESVKSSSDNVKKITLDIDLEAPAVPEVEEEEAIDVVKKIDDCNDESLAKVAAEAIVAITGMSSQQDQAGSSSEVAVCSDDNDRLLLLVDVIENAGAVSKELDEYEEMTLKLEPTKEEDYMPKPLAPDFREPEEAGPMAGPTRPRRGQARRGRPRRDFQRDIFPGLVSLSRHEVTEDLQIFGGLMKATGHSWNVGLTRRNGTRGRRKSLAVAVQPPLAATPSAPPSPPPLPPPLSEVVGLEERSLTGWGKTTRRPRRQRCAAGSSVAVPLT 872
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan1g02772 872 MobiDBLite consensus disorder prediction 728 756 - -
Ecan1g02772 872 MobiDBLite consensus disorder prediction 246 278 - -
Ecan1g02772 872 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 16 861 - -
Ecan1g02772 872 Pfam Plant protein of unknown function (DUF863) 316 861 IPR008581 -
Ecan1g02772 872 Pfam Plant protein of unknown function (DUF863) 141 213 IPR008581 -
Ecan1g02772 872 Pfam Plant protein of unknown function (DUF863) 218 314 IPR008581 -
Ecan1g02772 872 MobiDBLite consensus disorder prediction 819 836 - -
Ecan1g02772 872 MobiDBLite consensus disorder prediction 818 872 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan1g02772 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
83083 Ecan1g02772 Ecan8g02954
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr1:42047557 Ecan6g02202 Ecan-Chr6:32701327 dispersed
Ecan Ecan-Chr1:42047557 Ecan6g02201 Ecan-Chr6:32701327 wgd
Ecan Ecan-Chr1:42047557 Ecan8g02954 Ecan-Chr8:39830023 wgd