Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g00004 | ATGAATAATGGAGGAGATGTTCACAAGGTATGGGAGATCAGAACCTTAAAGAAGAAGGTTGGAGCAGACGAGGCTCGCAAGTTCCTTGAAAGAATCGCCAAACAGGTTCAACCCATCATGCGGAAACATAATTGGAGAGTCAAAGTTCTTTCTGAAATGTGTCCTAAAAACCCGCGGCTTTTGGGGCTGAACGTGGGACATGGTATTCATGTAAAGCTCAGACTTCGAAGACCGAATACAGATTGGGACTTTTACCCGTTTGATCAAGTTCTTGATACGATGCTTCATGAACTGTGTCATAACTCTATTGGTCCCCATAATGTCGCTTTCTATAAACTCTGGGATGATCTTAGGAAGGAATGTGAGGAGTTTATGAGTAAAGGAATTACTGGGTCTGGTGACGGGTTTGATCTTCCCGGTAGACGTTTAGGTGGCTTCACTCGACAACCACCCCTTTCGTCTCTCCGCCAGACTGCACTTGTTGCCGCTCAAAATAGAGCCCGTTTGGGATCTCTTTTACCAGCTGGCCCTAAACGCCTTGGTGGCGATAAATCTATTATGTCTTCCCTGACTCCCGGACAAGCAGCTGCGATGGCTGCAGAAAGGAGATTACAGGACGACATATGGTGTGGCATACAGCAACTAGTCGAAGAGGAAGAAGAAACTGTGCCACAAAGCTCGGCTTCCTCTAGTGTTCTAGGTTCCAAAAGAAGTCACCAATCAAATGATAGTCATTCAGAACTAAATTTTGTTGACTTGACGGATGTTCCCTCGGTATCCAATGCAGAAGCTACAAACAACATTTCCGTAAATAAAAGAAGTCGGCAAACAGAATGTTGTATTGATTTAACAACTGAAGACTTTGCTAGCGGATCTACTAGCAATGAAAAAACAGGACGTGACACAAAGTCTTCCGGGTGGGAGTGCATGACATGCACATTGTTGAATCCGCCATTGGCTCCAATATGCGAGCTTTGTGGAACCCTCAAGCCAAAAGCAGAGGAGAAGTACAAGTCATGGTCATGCAAATTTTGTACAATGGTAAACACTGTGAAGATGGAGAAATGTGGAGCATGTGAGCAGTGGAGATATTCTCATGGCCAGCCCATAGCAACCCCATCACCAAATGTTGGTACTTAA | 1140 | 44.82 | MNNGGDVHKVWEIRTLKKKVGADEARKFLERIAKQVQPIMRKHNWRVKVLSEMCPKNPRLLGLNVGHGIHVKLRLRRPNTDWDFYPFDQVLDTMLHELCHNSIGPHNVAFYKLWDDLRKECEEFMSKGITGSGDGFDLPGRRLGGFTRQPPLSSLRQTALVAAQNRARLGSLLPAGPKRLGGDKSIMSSLTPGQAAAMAAERRLQDDIWCGIQQLVEEEEETVPQSSASSSVLGSKRSHQSNDSHSELNFVDLTDVPSVSNAEATNNISVNKRSRQTECCIDLTTEDFASGSTSNEKTGRDTKSSGWECMTCTLLNPPLAPICELCGTLKPKAEEKYKSWSCKFCTMVNTVKMEKCGACEQWRYSHGQPIATPSPNVGT | 379 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g00004 | 379 | ProSitePatterns | Zinc finger RanBP2-type signature. | 307 | 326 | IPR001876 | - | |
| Ecan3g00004 | 379 | PANTHER | DNA-DEPENDENT METALLOPROTEASE WSS1 | 3 | 378 | IPR053000 | GO:0005634(PANTHER)|GO:0006281(PANTHER)|GO:0008237(PANTHER) | |
| Ecan3g00004 | 379 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 303 | 332 | IPR001876 | - | |
| Ecan3g00004 | 379 | ProSitePatterns | Zinc finger RanBP2-type signature. | 340 | 359 | IPR001876 | - | |
| Ecan3g00004 | 379 | Pfam | WLM domain | 9 | 204 | IPR013536 | - | |
| Ecan3g00004 | 379 | MobiDBLite | consensus disorder prediction | 219 | 247 | - | - | |
| Ecan3g00004 | 379 | ProSiteProfiles | WLM domain profile. | 1 | 205 | IPR013536 | - | |
| Ecan3g00004 | 379 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 336 | 365 | IPR001876 | - | |
| Ecan3g00004 | 379 | Gene3D | - | 300 | 339 | - | - | |
| Ecan3g00004 | 379 | SMART | zf-4 | 305 | 329 | IPR001876 | - | |
| Ecan3g00004 | 379 | SMART | zf-4 | 338 | 362 | IPR001876 | - | |
| Ecan3g00004 | 379 | SUPERFAMILY | Ran binding protein zinc finger-like | 303 | 330 | IPR036443 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g00004 | K22685 | DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] |