Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g00033	ATGAAGAGGGTGGGGGTAGAGAAGGAAAGCATTCAAGTGATCGCGCAAAGCATCGGGGTATCGAATCTGTCGGCGGAGGTGTTGCCTGCTCTGGCTTCCGACATCGAGTACCGGGTGCGGGAGATCATGCAGGAGGCTATCAAATGTATGCATCACTCCAAGCGCACCTGTCTGACGTCACTCGACGTTGATACTGCCCTCCAACTCAGAAAAATGGAGCCCATATATGTTGCGTCTTCCGCTAATTCTTCTTCGTTGCAATTCAAAAGAGCTCCCCAGAGTAAGGATTTGTTTTACATCCAAGATAAGGATGTCGATTTTAGGGAGGTAATTAACGCCCCCCTTCCAAAACCGCCTCCTGATACCGCACTTGTCACTCACTGGCTTGCTATTGAAGGCGTTCAACCTGCCATTCCTCTTAATCCTCCCCTTGAAGTACTTGTATCCCCGTTTGATAATAAGAAACTTGATTCCAAAGATGATGGGGTTTCAATTGACCTTAAATCTCCTTCCAAACATGTGCTCTCAATAGAACTCCAGCTTTACTTTGAAAAAGTTACGGACCTTACTGTAAGTCGTTCAAATTCGCCTATCTTCAACAAAGCATTGTTGAGTTTGGCGACTGATGCAGGGCTTCATCCTTTGCTGCCTTATTTTATATACTTTGTTGCTGAAGAGGTCACTCGCAACCTAAGCAACTTTCATCTTTTGTTTGCTTTAATGCGCCTTGTACGGAGTCTTCTACAGAACCCATTTCTGCATATTGAACCTTATCTGCACCAACTGATGCCATCTGTAATGACCTGTCTTGTTGCAAAAAGCCTGGGGAATAAGTTAACTGATAACCACTGGGAACTTAGAAACTTCACAGCTAACGTGGTGGCTTTAATATGTAGGAGGTTTGGATATGGGTTTCATAATCTTCAATTACGCGTGACTAGAACTCTTCTTCATGCTTTTATGGACCCAGCAAAAGCGTTTCCCCAGCATTATGGTGCTATAAAAGGGATTACTTCCCTTGGATCAAGTGTGGTTCGTCTCCTTTTGCTACCAAATCTCGATCCGTATCTACAATTTATAGAACCAGAAATGCACCCTGAGAAGCAAAAAAATGAGAGCAGAAGGCAGGAGGCTTGGAGAGTGCATGGTGCGTTAATGTGTGCAGCTGGTTTATGTATTTACAGTCAACTTAAGATGATTCCCAATCTCTTGTCTCCGCCATCACATAGCATCTGGAAGAGGAATGGAAAATTTGGGACAGCAAATCCAAACAAACGGAAGTTGGGAAGCATGAACAACATGATGGATCAGTCACTCAAAAAGGTAGCAACAGCCGACGGTTCACATTTAGTGAAGGTAGAGATGCAAGGACCCAGCAGTGGGTTTTCAATAACTCATGGTGGCACAGATGCAGGAATGCACCAATTACCCAGGTTTTTACCTAATGACCAAATGGCAGGGAGCAGTGGTAGGAGAGACAAGTTTGGTGGTGCAACTCACTCATCAGTGGCTGTGTCTCGAGCATGGAAAAAGGAAATAAATGCTGGACATTTGCTCCCCAAACTCTATGATCTTTTTGGTCAAGGCATGCTCCCATTTGTACCTTCGCCGGAATTGTGTAATTTACACCTATGA	1635	44.46	MKRVGVEKESIQVIAQSIGVSNLSAEVLPALASDIEYRVREIMQEAIKCMHHSKRTCLTSLDVDTALQLRKMEPIYVASSANSSSLQFKRAPQSKDLFYIQDKDVDFREVINAPLPKPPPDTALVTHWLAIEGVQPAIPLNPPLEVLVSPFDNKKLDSKDDGVSIDLKSPSKHVLSIELQLYFEKVTDLTVSRSNSPIFNKALLSLATDAGLHPLLPYFIYFVAEEVTRNLSNFHLLFALMRLVRSLLQNPFLHIEPYLHQLMPSVMTCLVAKSLGNKLTDNHWELRNFTANVVALICRRFGYGFHNLQLRVTRTLLHAFMDPAKAFPQHYGAIKGITSLGSSVVRLLLLPNLDPYLQFIEPEMHPEKQKNESRRQEAWRVHGALMCAAGLCIYSQLKMIPNLLSPPSHSIWKRNGKFGTANPNKRKLGSMNNMMDQSLKKVATADGSHLVKVEMQGPSSGFSITHGGTDAGMHQLPRFLPNDQMAGSSGRRDKFGGATHSSVAVSRAWKKEINAGHLLPKLYDLFGQGMLPFVPSPELCNLHL	544

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g00033	544	CDD	TAF6C	172	388	IPR011442	GO:0006367(InterPro)
	Ecan3g00033	544	Pfam	TATA box binding protein associated factor (TAF)	6	67	IPR004823	-
	Ecan3g00033	544	Gene3D	-	171	375	IPR046344	GO:0006367(InterPro)
	Ecan3g00033	544	FunFam	Transcription initiation factor TFIID subunit 6	172	367	-	-
	Ecan3g00033	544	Gene3D	Histone, subunit A	4	69	IPR009072	GO:0046982(InterPro)
	Ecan3g00033	544	SUPERFAMILY	ARM repeat	197	393	IPR016024	-
	Ecan3g00033	544	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	4	537	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(PANTHER)\|GO:0016251(InterPro)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)
	Ecan3g00033	544	SMART	TAF-cls	4	70	IPR004823	-
	Ecan3g00033	544	Pfam	TAF6 C-terminal HEAT repeat domain	172	353	IPR011442	GO:0006367(InterPro)
	Ecan3g00033	544	SUPERFAMILY	Histone-fold	5	68	IPR009072	GO:0046982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g00033	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:209555	Ecan4g02654	Ecan-Chr4:36207950	dispersed