AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g00066 | ATGGGCTCAATCAAAGAAATGAAACCATTGCAGCTGGAGATAAAAGATTGTTCAGCATCTACTACTCAAAATGGCGGCATTTCAAAGGCTAATGAAAAATCAGATTTTGTCGAAAGCGGAAAGAGTAGTATGTGTAGAGGAAGTACAAGTACCGATTTAAGTGATGAAAGTAGTTACAGCACTTTCAGTAGTAGCATCAACAAACCACATAAATCAAATGATTCTCGGTGGGAGGCGATCCAAGCCATTCGATTAAGAGATGGAGTCTTGGGTTTGAACCATTTTAAATTGTTAAAAAGATTGGGTTGTGGTGATATTGGTAGCGTTTATCTTTGTGAGCTTACCGGTATGAAAGCTTATTTTGCAATGAAAGTGATGGATAAAGTGTCGCTTGAGGAGCGCAACAAGCTATTAAGAGTGGAAACAGAAAAGGAAATACTTCAATCTTTGGATCATCCTTTTCTGCCAACTTTGTATACTCATTTTGAGACGGATAAATTTTCATGTTTGGTTATGGAGTTTTGCCCAGGAGGTGATTTGCACATGTTAAGACAGAGGCAACCAGGAAAGCGTTTTTGTGAACAAGCTGTCAAGTTTTATGTTGCAGAAATACTTCTTGCTATGGAATACCTCCATATGCTTGGAATAGTTTATCGTGATTTAAAACCAGAAAATGTTCTTGTGAGGGAAGATGGTCACATAATGCTTACCGACTTTGATCTTTCCCTACGTTGTTCAGTCAGCCCAACACTCGTCAATACATCATCTTTAGACAACCAACCCCTTTTAAAAAGCTCGGGGTATTGTGCTCAGCCAGCTTGCATTGAGCCACCTTCTTGTATTCAACCCTCATGTGTAGTTCGCACATCTTGTTTCTCTCCGAGACTTTTCAAGTCCAAGAAGGACAAGAAACCCAAGTCTGAAATTGGCAACCAAGTAAGCCCGTTACCCGAGCTTATGGCCGAGCCGACCGGAGTTCGTTCGATGTCCTTTGTTGGGACCCATGAGTATTTAGCCCCAGAGATTATTAAAAATGAAGGGCATGGCAGTGCCGTAGACTGGTGGACCCTTGGCATTTTTTTGTATGAGTTATTGTTTGGTAAAACTCCATTTAAAGGGGTAGGTAATCGGGCTACATTGATGAACGTTGTTGGGCAGCCATTGAGGTTCCCTGAGTCGCCGGTTGTGAGTTTTGCGACTAGGGATTTGATAAGGGGTTTACTAGTGAAAGATCCAAGGAACCGGTTGGCATACAAGAGAGGAGCTACCGAAATCAAGCAACATCCTTTTTTTGAAGGTGTTAACTGGGCTTTGATTCGTTGCGCAAGTCCACCTGAAATCCCGAAGGCTGTAGTGATTGAGCGCATTGCTTCACCGGTGACATCCATTATGGAAAAAAAGGTTGCTGCACTCACGGTTGCACCCGAGAAGAAGGCCTCGGGGAATTATCTCGAGTTTGATTTCTTTTAA | 1470 | 42.24 | MGSIKEMKPLQLEIKDCSASTTQNGGISKANEKSDFVESGKSSMCRGSTSTDLSDESSYSTFSSSINKPHKSNDSRWEAIQAIRLRDGVLGLNHFKLLKRLGCGDIGSVYLCELTGMKAYFAMKVMDKVSLEERNKLLRVETEKEILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHMLRQRQPGKRFCEQAVKFYVAEILLAMEYLHMLGIVYRDLKPENVLVREDGHIMLTDFDLSLRCSVSPTLVNTSSLDNQPLLKSSGYCAQPACIEPPSCIQPSCVVRTSCFSPRLFKSKKDKKPKSEIGNQVSPLPELMAEPTGVRSMSFVGTHEYLAPEIIKNEGHGSAVDWWTLGIFLYELLFGKTPFKGVGNRATLMNVVGQPLRFPESPVVSFATRDLIRGLLVKDPRNRLAYKRGATEIKQHPFFEGVNWALIRCASPPEIPKAVVIERIASPVTSIMEKKVAALTVAPEKKASGNYLEFDFF | 489 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g00066 | 489 | Gene3D | Transferase(Phosphotransferase) domain 1 | 328 | 449 | - | - | |
| Ecan3g00066 | 489 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 459 | IPR011009 | - | |
| Ecan3g00066 | 489 | Gene3D | Transferase(Phosphotransferase) domain 1 | 179 | 254 | - | - | |
| Ecan3g00066 | 489 | Gene3D | Phosphorylase Kinase; domain 1 | 93 | 178 | - | - | |
| Ecan3g00066 | 489 | FunFam | serine-threonine-protein kinase D6PK-like | 179 | 246 | - | - | |
| Ecan3g00066 | 489 | Pfam | Protein kinase domain | 328 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Ecan3g00066 | 489 | Pfam | Protein kinase domain | 96 | 249 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Ecan3g00066 | 489 | CDD | STKc-phototropin-like | 94 | 449 | - | - | |
| Ecan3g00066 | 489 | MobiDBLite | consensus disorder prediction | 19 | 72 | - | - | |
| Ecan3g00066 | 489 | ProSiteProfiles | Protein kinase domain profile. | 95 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Ecan3g00066 | 489 | ProSitePatterns | Serine-Threonine protein kinases active-site signature. | 216 | 228 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Ecan3g00066 | 489 | FunFam | serine-threonine-protein kinase D6PK-like | 326 | 449 | - | - | |
| Ecan3g00066 | 489 | PANTHER | FLIPPASE KINASE 1-RELATED | 29 | 454 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Ecan3g00066 | 489 | SMART | serkin-6 | 95 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Ecan3g00066 | 489 | FunFam | Serine-threonine-protein kinase D6PK-like | 93 | 178 | - | - | |
| Ecan3g00066 | 489 | MobiDBLite | consensus disorder prediction | 37 | 70 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g00066 | K08286 | protein-serine/threonine kinase [EC:2.7.11.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:493193 | Ecan3g00068 | Ecan-Chr3:493193 | dispersed | |
| Ecan | Ecan-Chr3:493193 | Ecan3g00066 | Ecan-Chr3:493193 | tandem | |
| Ecan | Ecan-Chr3:493193 | Ecan3g00067 | Ecan-Chr3:493193 | tandem |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ecan8g00955 | . | 62 | 910 | AGC Kinase gene family | AT5G58140 | 72.883 | 0.0 | 1277.0 | |
| Ecan8g00956 | . | 62 | 910 | AGC Kinase gene family | AT5G58140 | 72.883 | 0.0 | 1277.0 | |
| Ecan8g02608 | . | 96 | 586 | AGC Kinase gene family | AT5G47750 | 68.337 | 0.0 | 677.0 | |
| Ecan1g04637 | . | 16 | 408 | AGC Kinase gene family | AT3G20830 | 55.714 | 2.10e-157 | 448.0 | |
| Ecan8g01331 | . | 135 | 379 | AGC Kinase gene family | AT3G08720 | 38.462 | 1.96e-46 | 172.0 | |
| Ecan8g01957 | ACH | 64 | 295 | AGC Kinase gene family | AT5G04510 | 26.255 | 2.43e-10 | 58.9 | |
| Ecan8g02758 | . | 134 | 234 | AGC Kinase gene family | AT5G58140 | 44.545 | 1.38e-21 | 98.2 | |
| Ecan9g01065 | . | 1 | 466 | AGC Kinase gene family | AT3G08720 | 67.949 | 0.0 | 659.0 | |
| Ecan9g00351 | . | 1 | 996 | AGC Kinase gene family | AT3G45780 | 69.075 | 0.0 | 1399.0 | |
| Ecan9g02415 | . | 135 | 379 | AGC Kinase gene family | AT3G08720 | 36.437 | 3.24e-44 | 164.0 | |
| Ecan9g02416 | . | 135 | 379 | AGC Kinase gene family | AT3G08720 | 36.437 | 1.37e-44 | 163.0 | |
| Ecan9g02836 | . | 375 | 949 | AGC Kinase gene family | AT2G36350 | 60.381 | 0.0 | 675.0 | |
| Ecan1g04489 | . | 1 | 451 | AGC Kinase gene family | AT3G44610 | 64.192 | 0.0 | 548.0 | |
| Ecan2g02084 | . | 112 | 1294 | AGC Kinase gene family | AT3G17850 | 66.197 | 0.0 | 1529.0 | |
| Ecan1g01386 | . | 30 | 1164 | AGC Kinase gene family | AT5G62310 | 58.04 | 0.0 | 1261.0 | |
| Ecan2g01140 | . | 112 | 555 | AGC Kinase gene family | AT1G79250 | 71.93 | 0.0 | 653.0 | |
| Ecan2g03300 | . | 23 | 459 | AGC Kinase gene family | AT3G08720 | 57.047 | 0.0 | 516.0 | |
| Ecan2g03301 | . | 23 | 459 | AGC Kinase gene family | AT3G08720 | 57.047 | 0.0 | 516.0 | |
| Ecan2g02959 | . | 10 | 504 | AGC Kinase gene family | AT5G09890 | 76.21 | 0.0 | 809.0 | |
| Ecan3g00068 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 73.78 | 0.0 | 738.0 | |
| Ecan3g00065 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 73.78 | 0.0 | 738.0 | |
| Ecan3g00067 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 73.78 | 0.0 | 738.0 | |
| Ecan3g00066 | . | 98 | 586 | AGC Kinase gene family | AT5G47750 | 73.78 | 0.0 | 738.0 | |
| Ecan3g01286 | . | 140 | 356 | AGC Kinase gene family | AT3G08720 | 25.0 | 7.70e-14 | 71.2 | |
| Ecan3g02781 | . | 11 | 373 | AGC Kinase gene family | AT3G25250 | 60.212 | 3.04e-159 | 453.0 | |
| Ecan3g02894 | . | 1 | 517 | AGC Kinase gene family | AT2G20470 | 78.035 | 0.0 | 843.0 | |
| Ecan3g02893 | . | 1 | 517 | AGC Kinase gene family | AT2G20470 | 78.035 | 0.0 | 843.0 | |
| Ecan3g03731 | . | 20 | 438 | AGC Kinase gene family | AT2G34650 | 59.519 | 0.0 | 515.0 | |
| Ecan3g03185 | . | 66 | 765 | AGC Kinase gene family | AT2G44830 | 65.211 | 0.0 | 844.0 | |
| Ecan3g02121 | . | 10 | 469 | AGC Kinase gene family | AT3G14370 | 60.213 | 0.0 | 533.0 | |
| Ecan4g03294 | . | 11 | 518 | AGC Kinase gene family | AT4G33080 | 78.278 | 0.0 | 822.0 | |
| Ecan4g03293 | . | 11 | 518 | AGC Kinase gene family | AT4G33080 | 78.278 | 0.0 | 818.0 | |
| Ecan4g02599 | . | 9 | 471 | AGC Kinase gene family | AT1G53700 | 62.5 | 0.0 | 541.0 | |
| Ecan4g02927 | . | 4 | 525 | AGC Kinase gene family | AT2G26700 | 58.569 | 0.0 | 574.0 | |
| Ecan4g00638 | . | 129 | 288 | AGC Kinase gene family | AT3G08730 | 26.667 | 1.56e-06 | 48.9 | |
| Ecan5g03088 | . | 1 | 538 | AGC Kinase gene family | AT4G14350 | 82.342 | 0.0 | 908.0 | |
| Ecan5g00107 | . | 40 | 263 | AGC Kinase gene family | AT5G04510 | 24.268 | 4.98e-11 | 65.1 | |
| Ecan5g03231 | . | 69 | 765 | AGC Kinase gene family | AT2G44830 | 66.246 | 0.0 | 880.0 | |
| Ecan5g00554 | . | 124 | 269 | AGC Kinase gene family | AT5G58140 | 36.774 | 9.28e-22 | 98.2 | |
| Ecan1g01038 | . | 102 | 1293 | AGC Kinase gene family | AT3G17850 | 65.735 | 0.0 | 1524.0 | |
| Ecan1g00421 | . | 119 | 514 | AGC Kinase gene family | AT5G58140 | 29.426 | 2.47e-52 | 184.0 | |
| Ecan1g00420 | . | 119 | 483 | AGC Kinase gene family | AT5G58140 | 28.649 | 8.64e-39 | 145.0 | |
| Ecan1g00418 | . | 119 | 480 | AGC Kinase gene family | AT5G58140 | 31.063 | 2.43e-49 | 175.0 | |
| Ecan1g00419 | . | 119 | 467 | AGC Kinase gene family | AT5G58140 | 29.661 | 6.14e-39 | 144.0 | |
| Ecan1g00378 | . | 1 | 934 | AGC Kinase gene family | AT3G52890 | 48.424 | 0.0 | 769.0 | |
| Ecan1g00379 | . | 1 | 723 | AGC Kinase gene family | AT3G52890 | 43.243 | 3.81e-159 | 482.0 | |
| Ecan6g01017 | . | 260 | 432 | AGC Kinase gene family | AT3G17850 | 65.318 | 9.04e-66 | 244.0 | |
| Ecan6g02456 | . | 3 | 451 | AGC Kinase gene family | AT3G44610 | 63.441 | 0.0 | 543.0 | |
| Ecan6g02250 | . | 10 | 499 | AGC Kinase gene family | AT5G40030 | 71.257 | 0.0 | 704.0 | |
| Ecan1g01912 | . | 4 | 491 | AGC Kinase gene family | AT5G04510 | 77.301 | 0.0 | 781.0 | |
| Ecan6g02918 | . | 71 | 451 | AGC Kinase gene family | AT3G44610 | 56.633 | 5.24e-156 | 447.0 | |
| Ecan1g01497 | . | 1 | 466 | AGC Kinase gene family | AT3G08720 | 67.865 | 0.0 | 642.0 | |
| Ecan6g03512 | . | 136 | 1164 | AGC Kinase gene family | AT5G62310 | 60.038 | 0.0 | 1214.0 | |
| Ecan6g02457 | . | 470 | 900 | AGC Kinase gene family | AT3G52890 | 63.426 | 0.0 | 575.0 | |
| Ecan6g02586 | . | 16 | 388 | AGC Kinase gene family | AT1G51170 | 57.641 | 3.49e-143 | 410.0 | |
| Ecan6g02339 | . | 81 | 578 | AGC Kinase gene family | AT3G27580 | 66.473 | 0.0 | 655.0 | |
| Ecan7g02332 | . | 1 | 557 | AGC Kinase gene family | AT2G20470 | 74.107 | 0.0 | 843.0 | |
| Ecan7g02184 | . | 4 | 385 | AGC Kinase gene family | AT3G25250 | 52.555 | 2.42e-138 | 400.0 | |
| Ecan8g00042 | . | 89 | 586 | AGC Kinase gene family | AT5G47750 | 79.208 | 0.0 | 805.0 | |
| Ecan8g01850 | . | 1 | 1007 | AGC Kinase gene family | AT1G45160 | 50.242 | 0.0 | 920.0 | |
| Ecan8g01849 | . | 1 | 1007 | AGC Kinase gene family | AT1G45160 | 50.242 | 0.0 | 920.0 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ecan | Pkinase | 7.3e-36 | CL0016 | PK | AGC_RSK-2 |