AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00070 ATGAACAACGGCAACATCAACGGCGATTGCAGGTACGTGATATCTCAAAATGCATACATTAAGCTCGTCCTTCATTCCTTGAAACACAAAACCTCCGCCGTTAACGGCGTCCTTCTCGGCCGTCTCTCCGCCGGCGATGTTGTTGAAATCTTCGATTCCGTCCCTCTTTTTCACTCTCCTCAGATCGGATTACTTCCTTCTCTTGAGATCTCCTTACTTATGATAGAAGAGTATTACAGTTCACAGGGACTGAGTATCGTTGGTTATTTCCACGCGAACGAGCGATTCGACGATAATGAGCTCGGTACTGTTGCTAGGAATATTGCTGATCATATCTATCGTTATTTTCCACAAGCTGCAGTTCTTTTGCTAGATAACAAAAAACTTGGAGCTTTGCAAAACAAGAAGGATACAGCTATAGTAATGCAGCTATATACACGAGACTCCTCAAAGAGCTGGAAGCAAGTTGAGTCGGATGGAACCAAGCGGATTACCACCAAGGAGCCATCTGCCAACGTTGTCCTATTGGATTTTATTTCATCGGAGAAATGGAATGATATTGTAGATTTTGATGACCACCTTGATGACATAAGCAAGGATTGGTCTAACTCGGAACTCTTCAAGTAA 627 43.22 MNNGNINGDCRYVISQNAYIKLVLHSLKHKTSAVNGVLLGRLSAGDVVEIFDSVPLFHSPQIGLLPSLEISLLMIEEYYSSQGLSIVGYFHANERFDDNELGTVARNIADHIYRYFPQAAVLLLDNKKLGALQNKKDTAIVMQLYTRDSSKSWKQVESDGTKRITTKEPSANVVLLDFISSEKWNDIVDFDDHLDDISKDWSNSELFK 208
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00070 208 PANTHER ER MEMBRANE PROTEIN COMPLEX 11 206 IPR005366 GO:0072546(InterPro)|GO:0072546(PANTHER)
Ecan3g00070 208 Pfam Uncharacterised protein family (UPF0172) 12 206 IPR005366 GO:0072546(InterPro)
Ecan3g00070 208 ProSiteProfiles MPN domain profile. 12 148 IPR037518 -
Ecan3g00070 208 CDD MPN-UPF0172 14 203 IPR005366 GO:0072546(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00070 K23569 ER membrane protein complex subunit 8/9