Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g00104 | ATGGTGGAAACTGTACGGACATACCAACATCAATGGCCCATAACAGAAACAAAAGAAGTAAAATGGTTGAAGCATTATTCATCTGATCATCAGATTTTGTTGGTGGGAGAAGGAGATTTTTCATTTTCACTTAGTTTGGGTTTGGCTTTTGGTGATGCTTCCAACATTGTGGCTACTTCTTTGGACTCTTTTGATCTTGTGATGAAGAAATACAAGGGAGCAAAAAGAAACTTGGATATCTTGTATTCTCTTGGAGCTCAGTTGTTACACGGAGTTGATGCCTTCAGAATGAAGCTTCATACAGATCTTCAAATGCGGAAGTTTGACCGGATCATTTATAACTTTCCACATGCCGGTTTCCATGGGAATGAAGACAACCAACGCATGATTATGATGCACAGAAATCTGGTTTGCGGTTTCTTTAAAAACGCAAGTGGCATGCTGCGTCCAGAGGGTGAAGTTCATGTAGCCCACAAGACTTCACATCCTTACCAATCTTGGAACATCGAAGAACTTGCTACTCAAAATTCCTTAAGATTGCTTGAATGCATAAAGTTCAGACTTGAAGATTATCCAGGTTACAACAACAAAAGAGGCGATGGAAAAAGATCTGACCAGCCATTTCATCTAGGAGAGTGTAGTACTTACAAGTTCGTATTGTCATTAAAAGCCAAAAAACCAACCACCTCATGTCAAAGAAGCCCTCATCAACCTCAAGAAATTTCATCACAAACACTGCAAATTAGTATGGCTAAGAATCCTGCTCCTGTTTTCAACAGCTCTGAATGCTTCCAGGTTTTCAAGGAGTATTTTGATCATGCACTATCAACATTTGGGCATGTTGATGAGCATATTTTCCGTTCTGTTCCGCATCTGCTGGAAATCGGGTTTGAAAGATGCAAGGCCAATATCCATGTTGATCCCTTAAATGCTTACACATATCTTTTGACAGAGCTTCAACATATGAGTAAACAGAGGTTATTATTTCTGCAAAACCATTTACTTGAGGCCGATCACCAGTATCAGTATGGCTTCTAA | 1038 | 39.6 | MVETVRTYQHQWPITETKEVKWLKHYSSDHQILLVGEGDFSFSLSLGLAFGDASNIVATSLDSFDLVMKKYKGAKRNLDILYSLGAQLLHGVDAFRMKLHTDLQMRKFDRIIYNFPHAGFHGNEDNQRMIMMHRNLVCGFFKNASGMLRPEGEVHVAHKTSHPYQSWNIEELATQNSLRLLECIKFRLEDYPGYNNKRGDGKRSDQPFHLGECSTYKFVLSLKAKKPTTSCQRSPHQPQEISSQTLQISMAKNPAPVFNSSECFQVFKEYFDHALSTFGHVDEHIFRSVPHLLEIGFERCKANIHVDPLNAYTYLLTELQHMSKQRLLFLQNHLLEADHQYQYGF | 345 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g00104 | 345 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 33 | 198 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) | |
| Ecan3g00104 | 345 | Gene3D | Vaccinia Virus protein VP39 | 34 | 187 | IPR029063 | - | |
| Ecan3g00104 | 345 | FunFam | Os09g0479300 protein | 30 | 181 | - | - | |
| Ecan3g00104 | 345 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 19 | 208 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Ecan3g00104 | 345 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 61 | 184 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g00104 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:745635 | Ecan3g00104 | Ecan-Chr3:774565 | dispersed | |
| Ecan | Ecan-Chr3:757820 | Ecan3g00104 | Ecan-Chr3:774565 | tandem |