AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00112 ATGTTGGAAAGCAGATTGATTTCGATTATTATAAGAAAAAACAAATCCATCAATCAATTTAAATCTTCTTATTCTTATTCATCTTCATCATCATTAAGAAATAGTAATCATAATGCTGGTCATACTCACCGATTCAATTTCCAAAATTATTACTCAAAGAATCCTTGTAGACATTTTTCAAACCCCCCAACCGCCAGAAGCTGTTTCGTTCGATCCTTTCATAATCTTAACAAGGGGTCCTTTAAGCCAACCTATAGATATATGTCAACTGTAGCTGCAACTGCTTCTAAAGAAAACAAGGAGGCATTGAAGCTTCTTGTTACTGCTGGACCTCATGCCCAGAAAGCAATAGGAATCTGGCTTTTTGCATCTGCTGCATGGGTGTTTAGTATGGTTGTTCTTGGTGGTGTCACACGACTCACCCGCTCTGGTCTTTCAATGACGGACTGGAAGTTTACTGGCACCCTTCCTCCCCTATCAGAAGAAGATTGGTTGATTGAGTTTGAGAAATATAAACGATCCCCTGAGTTCAAGCGTGTGAACAGAGGAATGGGTATTGATGATTTTAAATTCATCTACTGGATGGAATATGCACACCGGATGTGGGGAAGGGCATTAGGAATCATGTTTGCCCTTCCATTTTCATATTTTATTCGAAAAGGTTATATTAATCTACGGCTTGGAGCTAGACTCGCTGGTCTGTTTGCTCTTGGTGGTGGTCAAGGGATGATCGGCTGGTGGATGGTTAAAAGTGGTTTGGAAGAACCACCCTCAGAGTATTCTCAACCAAGAGTAAGCCCATACCGTCTTGCTGCTCACCTAACTTCAGCTTTTGCAATATATTGTGGGCTCTTCTGGACTGCTCTTTCTGTAGTCATGCCTGAACCTCCTACTGAGTCAATGACTTGGGTTAAAGGGGCTGCAAAAGTCCGAAGGCTTGCTCTTCCTGTTGGTATTCTTGTTGGTATAACTGCAGTTTCAGGAGCCTTTGTTGCAGGAAATGATGCGGGACATGCATTTAATACATTTCCAAAGATGGGTGATTCATGGATCCCAGAAGATGTTTTGAGTATGAAGCCACTTCTCCGAAACTTCTTTGAGAACACAGCAACTGTGCAGCTTGATCATCGTATACTTGCAACTGCCACCTTAGCATCTATTGCTGGTCTATGGTTGTCAACAAGAAAACTTGAACTACATCCAGCTATTCGTTCTTTGATCGGAAGCACATTGGGGATGGCTGCTTTACAGGTGACTTTGGGCGTATCAACTCTTTTATCTTATGTACCGGTTTCACTTGGCACCGCCCACCAAGCCGGGGCTTTGACTCTTTTGACTTTTATGCTTCTACTTAATCACACTGTACGCCGACCATCACCAATGCTTCTCAAATCACTTCCCGCAGTTGCAAAAACAATGTGA 1422 42.33 MLESRLISIIIRKNKSINQFKSSYSYSSSSSLRNSNHNAGHTHRFNFQNYYSKNPCRHFSNPPTARSCFVRSFHNLNKGSFKPTYRYMSTVAATASKENKEALKLLVTAGPHAQKAIGIWLFASAAWVFSMVVLGGVTRLTRSGLSMTDWKFTGTLPPLSEEDWLIEFEKYKRSPEFKRVNRGMGIDDFKFIYWMEYAHRMWGRALGIMFALPFSYFIRKGYINLRLGARLAGLFALGGGQGMIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPTESMTWVKGAAKVRRLALPVGILVGITAVSGAFVAGNDAGHAFNTFPKMGDSWIPEDVLSMKPLLRNFFENTATVQLDHRILATATLASIAGLWLSTRKLELHPAIRSLIGSTLGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPSPMLLKSLPAVAKTM 473
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00112 473 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 68 471 IPR023754 GO:0005743(PANTHER)|GO:0006784(InterPro)|GO:0006784(PANTHER)|GO:0016020(InterPro)|GO:0016653(InterPro)|GO:0016653(PANTHER)
Ecan3g00112 473 Hamap Heme A synthase [ctaA]. 114 458 IPR023754 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Ecan3g00112 473 Pfam Cytochrome oxidase assembly protein 119 448 IPR003780 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00112 K02259 heme a synthase [EC:1.17.99.9]