AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00126 ATGGAATTAGGAAATGAGTGTTTAGATGATATCGAAAAGAGCGGTGAGAGTGTGAGTGATGTGAAAAATAATGGAAATCATGAAGTTGAAAATATTGATAGGAAGGTATTGGATGGTGATGAAGAGAGTGTAAAAAAGGCGGTGAAAACAAAAGGGAGAGGTTTAAAGAAATGGAGAAGGATTCGTAGGGCGGAACCGGGTAAGGAAACGAGTAATAGTGTAGACGATAGTAATAGGAAAAGAGGTATGAGTGTTTTTCCTACTGGAATGAAACAGAGGAGTGACGGAGGAGGGTCTAGTTCGTCGACCAATGCTGTGTCGAATGTCGTTGTGAATGGTTTGGATCGTGTAGGTTTAGGTCAGGGATTTGATATTGCGTCTAGGGCGGATTCTGAAAACAGTAGGTCTTCGACGGGAGCTAGTGCTCCTCCGAGGATGAATCATGAGTTGCCTATGTTGGGACAAGGAATTGATAGGAATGTGAGGAATGTTGGTGGGATGGGATATGGTATTTCGGTGAAAGGTGATGGACGCGAGAAAGGGTTGAAAAAGGCTAAAGGGGTTAGGATTAAGAAGGAGAATTCGATTTCTAGTATGGAGTCTGATTCTAGAAGCAACAATTTTGTGTTTATGCAGGGTGCTAGCTCTATGACGAGCAATGGTAGGCGGAATGGGAGGTCGGGGAATTATGAGGAAGATGATAGTGATGATGGTCGTAATGGTGATGGATGTTTAAATGAGGGAGGAGGAATTACGTTTAGTAAAAATGAGGGTGATTTTGAAGATGTTTTCCAAAATTTAGCGGGTCAGATATCTTGGGGGGTTAATGGTGACAAGGCTGATGGTCATGTGGGGTCAGAGATTCGGAATACTCTGTTGGAATCGATTATGCCACTCCAGCTGGCTCAAGAAGCACTTGAGAGAGAAGTCCAGAAATTAAGGGATGTTGGTCAAGAGTCTACACTATCCTCTGATAATTCAGTTCAACCATCAGGATCTACTTTTGTCGATGAAGAGTGGCAATTTAGTAACAGCAATCAGGTTGCTTTACAGAGCAAACTTGAGGAGGCCCTTGCTATGCTTAAGCTCAAGGATACCAAGATTTCTAAGCTTGAATCCGCCTTGAATGCCGAAGACATAAAAAGCAAGCATGAGGAACTCTTGACACAAAGAATTTCTGCCGAATTGGAATATCTAGTCATAGTGAATACAATTCAAAACATCAAGGCGGAGGATTCTATAAATCTAGTCAAATGTACCATACAACAAACGAACGTCCCAGCAGTAGAGCCAGTTCAACTTGATGATGCATGTATACAAGAAGATGCTAAGAACCTGGAAAATAGGGTATCCGATTATGCATATTATTTTACACTCCAGTTGGTTTTACTTCTTGTAGTCTTGTATCTATTTGTCTTGAAGTTTTCTAACCAAACTGTGGAGATTATACCTACTTAG 1458 41.43 MELGNECLDDIEKSGESVSDVKNNGNHEVENIDRKVLDGDEESVKKAVKTKGRGLKKWRRIRRAEPGKETSNSVDDSNRKRGMSVFPTGMKQRSDGGGSSSSTNAVSNVVVNGLDRVGLGQGFDIASRADSENSRSSTGASAPPRMNHELPMLGQGIDRNVRNVGGMGYGISVKGDGREKGLKKAKGVRIKKENSISSMESDSRSNNFVFMQGASSMTSNGRRNGRSGNYEEDDSDDGRNGDGCLNEGGGITFSKNEGDFEDVFQNLAGQISWGVNGDKADGHVGSEIRNTLLESIMPLQLAQEALEREVQKLRDVGQESTLSSDNSVQPSGSTFVDEEWQFSNSNQVALQSKLEEALAMLKLKDTKISKLESALNAEDIKSKHEELLTQRISAELEYLVIVNTIQNIKAEDSINLVKCTIQQTNVPAVEPVQLDDACIQEDAKNLENRVSDYAYYFTLQLVLLLVVLYLFVLKFSNQTVEIIPT 485
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00126 485 MobiDBLite consensus disorder prediction 214 245 - -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 1 17 - -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 125 148 - -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 1 27 - -
Ecan3g00126 485 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 11 485 IPR044696 -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 43 104 - -
Ecan3g00126 485 Coils Coil 299 319 - -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 127 143 - -
Ecan3g00126 485 MobiDBLite consensus disorder prediction 62 76 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00126 K27869 WPP domain-interacting protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
84468 Ecan3g00126 Ecan5g01987
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:1015812 Ecan5g01987 Ecan-Chr5:33215643 wgd