Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g00143 | ATGCTTAAGTGGGTATTATTCTATGACCATTTGGTTCTTTGCTCTTGTGCCTACTGCAGAGTTATTATTCTAACACTAGGATGGATAATATTCCTCTCATGCTACATTCCTGTGCATATGCTACTAAAAGGCCATGATAAATTGAGGAAAAGGTTAGAGAGAGCTCTGGTTGAGTTGATTTGCAGTTTCTTTGTGGCATCATGGACAGGGGTTGTCAAGTATCATGGTCCACGACCATGTGCAAGGCCAAAACAGGTATTTGTGGCCAATCATACATCAATGATTGATTTCATTGTTTTAGAACAGATGACTGCATTTGCAGTCATTATGCAGAAACACCCTGGCTGGGTTGGACTTCTGCAAAGCACTATTTTGGAAAGTGTGGGATGTATATGGTTCAATCGTTCTGAAACAAAGGATCGTGAAATAGTAGCTAGAAAGTTAAGGGAACATGTTGAAGGATCCGACAACAATCCTCTTCTTATATTCCCTGAAGGAACTTGTGTAAATAATAACTACACTGTTATGTTTAAAAAGGTCCAAAGATTACTGATCCATCAGTGTTAA | 567 | 38.8 | MLKWVLFYDHLVLCSCAYCRVIILTLGWIIFLSCYIPVHMLLKGHDKLRKRLERALVELICSFFVASWTGVVKYHGPRPCARPKQVFVANHTSMIDFIVLEQMTAFAVIMQKHPGWVGLLQSTILESVGCIWFNRSETKDREIVARKLREHVEGSDNNPLLIFPEGTCVNNNYTVMFKKVQRLLIHQC | 188 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g00143 | 188 | CDD | LPLAT-LPCAT1-like | 60 | 179 | IPR045252 | GO:0008374(InterPro) | |
| Ecan3g00143 | 188 | Pfam | Acyltransferase | 72 | 179 | IPR002123 | GO:0016746(InterPro) | |
| Ecan3g00143 | 188 | SUPERFAMILY | Glycerol-3-phosphate (1)-acyltransferase | 12 | 178 | - | - | |
| Ecan3g00143 | 188 | PANTHER | PHOSPHOLIPID ACYLTRANSFERASE | 14 | 179 | - | GO:0004366(PANTHER)|GO:0005783(PANTHER)|GO:0019432(PANTHER) | |
| Ecan3g00143 | 188 | SMART | plsc-2 | 85 | 186 | IPR002123 | GO:0016746(InterPro) | |
| Ecan3g00143 | 188 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g00143 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:1250321 | Ecan3g00143 | Ecan-Chr3:1273384 | proximal | |
| Ecan | Ecan-Chr3:1273384 | Ecan3g00144 | Ecan-Chr3:1273384 | tandem |