AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00198 ATGGCGACAAAAAAGAGTGTAAGTAGCTTGAAGGAAGGAGATCTGAAAGGAAAAAGAGTGTTTGTAAGGGCAGATCTGAACGTACCTTTGGATGATTCCTTTAAGATCACCGATGACACGCGCATACGCGCCGCCGTACCTACTATTAAATACTTGATGTCTAATGGCGCTCGAGTCATCCTTTCTTCTCATCTGGGACGACCAAAGGGCGTTACACCAAAATACAGTCTGAAGCCACTTGTTGGTAGACTCTCTGAGGTTCTTGGAGTTGAGGTCAAGATGGCAGACGATTGCATTGGTCCTGATGTTGAGAAACTGGTTGCTGAGATCCCAGAAGGTGGTGTCTTGCTTCTTGAAAATGTCAGGTTCTATAAGGAGGAAGAGAAGAATGATCCTGAGTTTGCAAAGAAACTTGCATCACTAGCAGACTTGTATGTTAATGATGCTTTTGGCACCGCACATAGGGCACATGCATCCACCGAAGGTGTTGCAAAGTACTTGAAGCCTGCTGTTGCTGGGTACCTCATGCAGAAGGAGCTTGACTACCTTGTTGGAGCTGTATCAAATCCCAAGAAGCCATTTGCTGCCATTGTTGGCGGGTCGAAGGTATCAAGTAAAATTGGTGTGATTGAGTCATTGTTAGAGAAGGTCGACATCCTTGTGCTTGGTGGAGGTATGATCTTCACTTTCTATAAAGCCCAAGGATACAAAGTTGGGTCGTCCCTTGTGGAAGAAGATAAACTTGACCTTGCCACATCACTTCTTGAAAAAGCTAAGTCAAAGGGGGTGTCTCTTCTACTCCCAACTGATGTTGTAATTGCTGACAAGTTTGCTGCCGATGCCAACAGCAAGACTGTTCCAGCCAATGAAATTCCTGATGGTTGGATGGGATTGGACATTGGACCAGATTCCATCAAGTCATTCAGTGAAACCTTGGATACTACCAAAACTATTATCTGGAATGGGCCAATGGGTGTGTTTGAGTTCGAGAAATTCGCTGCAGGAACAACGGCAATTGCCAAGAAATTGGCAGAGCTCAGTGGGAAGGGAGTTACAACCATCATTGGGGGAGGTGATTCAGTTGCAGCTGTGGAGAAGGCTGGACTTGCTGACAAGATGAGCCACATCTCTACAGGTGGCGGTGCTAGCTTGGAGCTACTCGAGGGGAAGACCCTTCCTGGCGTGCTTGCCTTGAATGAAGCTTGA 1206 46.43 MATKKSVSSLKEGDLKGKRVFVRADLNVPLDDSFKITDDTRIRAAVPTIKYLMSNGARVILSSHLGRPKGVTPKYSLKPLVGRLSEVLGVEVKMADDCIGPDVEKLVAEIPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGYLMQKELDYLVGAVSNPKKPFAAIVGGSKVSSKIGVIESLLEKVDILVLGGGMIFTFYKAQGYKVGSSLVEEDKLDLATSLLEKAKSKGVSLLLPTDVVIADKFAADANSKTVPANEIPDGWMGLDIGPDSIKSFSETLDTTKTIIWNGPMGVFEFEKFAAGTTAIAKKLAELSGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALNEA 401
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00198 401 FunFam Phosphoglycerate kinase 11 177 - -
Ecan3g00198 401 SUPERFAMILY Phosphoglycerate kinase 8 400 IPR036043 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 Gene3D - 7 184 IPR015824 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 CDD Phosphoglycerate-kinase 10 400 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PIRSF Pgk 2 401 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 Hamap Phosphoglycerate kinase [pgk]. 9 400 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 Pfam Phosphoglycerate kinase 11 390 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 FunFam Phosphoglycerate kinase 178 390 - -
Ecan3g00198 401 Gene3D - 187 399 IPR015824 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 36 58 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 113 128 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 14 30 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 141 163 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 195 214 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 172 194 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 317 342 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 353 364 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PRINTS Phosphoglycerate kinase family signature 376 393 IPR001576 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 ProSitePatterns Phosphoglycerate kinase signature. 19 29 IPR015911 GO:0004618(InterPro)|GO:0006096(InterPro)
Ecan3g00198 401 PANTHER PHOSPHOGLYCERATE KINASE 3 400 IPR001576 GO:0004618(InterPro)|GO:0004618(PANTHER)|GO:0005524(PANTHER)|GO:0005829(PANTHER)|GO:0006094(PANTHER)|GO:0006096(PANTHER)|GO:0006096(InterPro)|GO:0043531(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00198 K00927 phosphoglycerate kinase [EC:2.7.2.3]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
84478 Ecan3g00198 Ecan5g02023
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:2224949 Ecan5g02023 Ecan-Chr5:33626177 wgd