AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00248 ATGGAAGATGAGTATGGCATGTACAGGAAAGGAAGCAGTGGGTGGTCATACATGATTGGAAATGATGAATATCAAGAAACTGATGTATGGTCTGTTTATAATGATAGAAAAGATTTTGATTCAATAACTGTGAAGTCAAAAGGGTCAACTTCTGCATATTCTTCAAGAACTAGTACTGTTTCTCATTCAAATTCAGCCAGGATGATTCCTAGGCCTAATACCAACAATACTGATATCGAATCCTGGATTCCACGACGACAATCAGCACCTGTGAACATTCCTGACTGGTCCAAGATATATGGAAAGTCAAAGAGATCATCATCACAACAGGAATCTGCATTTCTTGATTATAATGGTTATGATGATGGCTATGGTGACCATAATGGGAAAGAAAGTTGGGACAGTGATGAGGATGATGATAATGGTGATGGGAACATAATGCCTCCCCATGAATGGATTGCACAAAAGCTTGCAAGGAGTCAAATTTCTTCGTTTTCGGTTTGTGAAGGTGCAGGAAGAACACTTAAAGGCAGAGATCTAAGTAGGGTAAGAAATGCTGTCTTGACAAAAACTGGATTTCTTGAATGA 588 38.78 MEDEYGMYRKGSSGWSYMIGNDEYQETDVWSVYNDRKDFDSITVKSKGSTSAYSSRTSTVSHSNSARMIPRPNTNNTDIESWIPRRQSAPVNIPDWSKIYGKSKRSSSQQESAFLDYNGYDDGYGDHNGKESWDSDEDDDNGDGNIMPPHEWIAQKLARSQISSFSVCEGAGRTLKGRDLSRVRNAVLTKTGFLE 195
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00248 195 MobiDBLite consensus disorder prediction 44 86 - -
Ecan3g00248 195 MobiDBLite consensus disorder prediction 44 83 - -
Ecan3g00248 195 Pfam Senescence regulator 23 195 IPR007608 -
Ecan3g00248 195 MobiDBLite consensus disorder prediction 125 148 - -
Ecan3g00248 195 PANTHER EXPRESSED PROTEIN 19 194 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00248 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:2782521 Ecan6g02746 Ecan-Chr6:37144670 dispersed
Ecan Ecan-Chr3:2782521 Ecan1g04584 Ecan-Chr1:57573142 transposed