AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g00254 ATGATGTCAGATGAACATCTTGATATTCAGCATAATAATAATAATGCTGTCTGTACAAGTTCAAAGTTGCCATTAAATAAAATAGAAAATAGAAACCAAAATTCGACAAGCTGCAGTAGTCGGGTGTTTTCCAAGTTCACTGTCACTCCTCTTAAAAGGTTTCAGTTGATTGATTCTGACTTGGATTCTGATCATCCTTGTGTCAGTGACAGCGATGATAATGATAAGAAATGTAATCGGCCAGTGAAAAGAAGGCAGCGGAACGTAGATGAATGTGTCCCAACGCTTGCCATGGATGACTTTTGGAAAAATGAATATTTCGGACCCATAAAACATGAAAGTGATGCTATTGAACAAACTAATCAAAGCAACCATGCTAAAAGAAGTTCCGTAAATGTGGATGACTCTTATCTCCCTGCTCATCGTTATTATTTTCATGATGATTTAAGGATCCAAGAGCTTGTTCGAAGTCGCCTGCCTAATTTTTCCCCTTTGGGCAACCCATTAAACAGAGATCTTGACCAGCCCGGTGCATCAAATATCGATTATAGGAGACAGTTCAGCTATGGTGAAAGCACAAAACAGTCTGCTACAAATACTAACGACAAGCAAAGCTCAAGCGGCAGAAAATCTTCAAGGAAGTTAAAGGCTGAAGAGACGTCTCAAGGTTGGGTAAACCCGAAGCTTTGTGTTAATAAAGCCACAACAAAAAGAGGTGCAAAAAGAAAGGGTCATGCAGCCCGTCAAACTCCAGGCCGTTGGCTAACAGGATCGGATGGAAAGAAAGTTTATGTTGGTAGAACCGGTCAAGAGCTAAGCGGCCGAGTTGCATACATGCGATACAAACAGGAGAGTGGAGGAGAATTCAAAAAGGGTAGAGGAAATCTGCTACTAAGAAGAAGAAATGAATGA 912 40.57 MMSDEHLDIQHNNNNAVCTSSKLPLNKIENRNQNSTSCSSRVFSKFTVTPLKRFQLIDSDLDSDHPCVSDSDDNDKKCNRPVKRRQRNVDECVPTLAMDDFWKNEYFGPIKHESDAIEQTNQSNHAKRSSVNVDDSYLPAHRYYFHDDLRIQELVRSRLPNFSPLGNPLNRDLDQPGASNIDYRRQFSYGESTKQSATNTNDKQSSSGRKSSRKLKAEETSQGWVNPKLCVNKATTKRGAKRKGHAARQTPGRWLTGSDGKKVYVGRTGQELSGRVAYMRYKQESGGEFKKGRGNLLLRRRNE 303
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g00254 303 MobiDBLite consensus disorder prediction 235 261 - -
Ecan3g00254 303 MobiDBLite consensus disorder prediction 189 206 - -
Ecan3g00254 303 MobiDBLite consensus disorder prediction 189 221 - -
Ecan3g00254 303 PANTHER RHO GTPASE-ACTIVATING PROTEIN 19 293 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g00254 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2106236 Ecan Ecan3g00254 Ecan-Chr3:2877792 Ecan5g01847 Ecan-Chr5:32080063
2126309 Ecan Ecan3g00253 Ecan-Chr3:2877792 Ecan3g00254 Ecan-Chr3:2877792