Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01774 | ATGATGAGCATTCATGGCAGTCTTCTTGAAGTCACGGTTGTTAGCTGCAGTAAACTGAAAGATACGGAATGGTTATCTAGGCAAGATCCTTATGTCTGTGTCGAATATGGTAGCAATAGATCTACCACGCGTACCTGTACAGATGGAGGCAAGAACCCTACATTCCAAGAGAAATTTGTGTATTCCCTAGTTGAGGGCCTAAGAGAGATCAACGTTGCCGTTTGGAATAGTAATACTGTCACACATGATGATTACATAGGTAGCGTAAGGATTCCATTGACAAAGGCTCTTTCTCATGGATTTGATGATAGTACCTGGCCATTACAAAGTAAAACTGGCAGGCATGCTGGAGAGGTTCGATTGATAATGCATTATTCCAATGGCAATAAACCATCTAAAAGTTTAGCTCCATCGTATGCTCCACATAACGCACCTCCGGTTCCTACGTACTCTGCTCCACCACCAGCTGCATATTATCCTCCAACTCCCTACCCATCCTACGCACCTAATTCAGGTGGCTATCCACCGGCTCCATATCCACCTCAGGCAACTACTTATCCTCCGACGCCTTATCCACCTAATCCAGCTTATGGATCCCATTATCCCCATGGTTCTCCATTTCCAGGGACTTATCCTCCACCACCATATTGA | 651 | 45.01 | MMSIHGSLLEVTVVSCSKLKDTEWLSRQDPYVCVEYGSNRSTTRTCTDGGKNPTFQEKFVYSLVEGLREINVAVWNSNTVTHDDYIGSVRIPLTKALSHGFDDSTWPLQSKTGRHAGEVRLIMHYSNGNKPSKSLAPSYAPHNAPPVPTYSAPPPAAYYPPTPYPSYAPNSGGYPPAPYPPQATTYPPTPYPPNPAYGSHYPHGSPFPGTYPPPPY | 216 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01774 | 216 | MobiDBLite | consensus disorder prediction | 170 | 216 | - | - | |
| Ecan3g01774 | 216 | Gene3D | C2 domain | 7 | 127 | IPR035892 | - | |
| Ecan3g01774 | 216 | CDD | C2 | 9 | 106 | - | - | |
| Ecan3g01774 | 216 | SMART | C2-3c | 8 | 105 | IPR000008 | - | |
| Ecan3g01774 | 216 | Pfam | C2 domain | 8 | 99 | IPR000008 | - | |
| Ecan3g01774 | 216 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Ecan3g01774 | 216 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 6 | 127 | IPR035892 | - | |
| Ecan3g01774 | 216 | MobiDBLite | consensus disorder prediction | 170 | 199 | - | - | |
| Ecan3g01774 | 216 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 4 | 214 | IPR052981 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01774 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84738 | Ecan3g01774 | Ecan4g02457 | |
| 84739 | Ecan3g01774 | Ecan5g01341 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr1:38565231 | Ecan3g01774 | Ecan-Chr3:29044985 | transposed | |
| Ecan | Ecan-Chr3:29044985 | Ecan4g02457 | Ecan-Chr4:34670427 | wgd | |
| Ecan | Ecan-Chr3:29044985 | Ecan5g01341 | Ecan-Chr5:26833999 | wgd |