Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01795 | ATGAACAAAAAGGCCCTGGCGGCCCTACTTTCATCCCTCATTTCAGACCTCTTAACCACCCTCTTAACCATCCCCCATACTTCCGGCAACCCATCATCTTTTCCGATCACCCCTTTTCTCATCAACTTCCTTTCGATCTCACAAACCATCACCACTCTTTCTCTTCTTTCCAACAAACGAAAACGGCCCGAACTTGAAGATGAGCCCGTTATTAGCCCGTCTAAAACCACCCGTTATGTCCAAGAAACCTTTACCGGAATACCTAGAAGCCCGGATTCTTTTAACCTTTGTTTTAAGATGAAATCGTCTACATTCGAGTGGCTTTCGGCCTTACTTGAGCCTTTGCTTGAGTGTCGTGACCCGGTCAACGAACCTTTAAAGTTGCCCGTAGAAGCCCGACTTGGTATCGGGCTTTTTAGACTCGCTACAGGTTCTGACTACGTCGAGGTTTCTAGACGTTTTAATGTTTCAGAACCTGTAGCGAGGTTTTGTGTTAATCAGTTGTGTAGGGTGTTATGCACAGATTTTAGGTTTTGGGTTGGGTTTCCTAGCCCAAATGAGTTGGGCCCGGTTAGTGAATCGTTTGAGAGACTAACCGGGTTGCTAAATTGTTGTGGGGTTATACATTGTACTAGATTTTTTGACTTAGAGGAACAAGAGCCCATAGCTGCTCAAGTTGTTGTAGATTCATCTTCAAAGATTCTAAACATTTTTGCTGGATACAATGGGAAAAGTAGTAGTCAACTTGTGCTTAAATCGTCGAGTTTATATAAAGATATTGAGTCAAATAACTTGCTAAATGACCAACCTATAGATTTAAAAGGTGTATCTATACCACAATACTTGGTTGGTGATCAAGGCTACCCTCTTCTTTCATGGTTAATGGTTCCATTTGTCCAACCCATGGTGAATTCGAATGAAGAGAATTTTAACAAAGTACATAATTCAATGATGGTTTCGGCTTTTAGGACAGTTGATAGTTTGAAGAATTGGGGTGTTTTGAGTAAACCAATTAAGGAAAAGATTAAGACGATGGTGGCTTATATTGGTGCTTGTTCGATTCTTCATAATGCATTGCTTATGAGGGAAGATTATTCTTCTTTATCCGAAGAACAGGATGAATATCTGCGATATAGTGACAGCCCGAAATATCATATGGAGACTAGTTTTTTGCATAGTTCAAATGAGCAAAAGGCATTTGAAATTAGAAGTACATTGGCTACAAGAGTAAGAAGACGTTAA | 1242 | 40.42 | MNKKALAALLSSLISDLLTTLLTIPHTSGNPSSFPITPFLINFLSISQTITTLSLLSNKRKRPELEDEPVISPSKTTRYVQETFTGIPRSPDSFNLCFKMKSSTFEWLSALLEPLLECRDPVNEPLKLPVEARLGIGLFRLATGSDYVEVSRRFNVSEPVARFCVNQLCRVLCTDFRFWVGFPSPNELGPVSESFERLTGLLNCCGVIHCTRFFDLEEQEPIAAQVVVDSSSKILNIFAGYNGKSSSQLVLKSSSLYKDIESNNLLNDQPIDLKGVSIPQYLVGDQGYPLLSWLMVPFVQPMVNSNEENFNKVHNSMMVSAFRTVDSLKNWGVLSKPIKEKIKTMVAYIGACSILHNALLMREDYSSLSEEQDEYLRYSDSPKYHMETSFLHSSNEQKAFEIRSTLATRVRRR | 413 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01795 | 413 | Pfam | DDE superfamily endonuclease | 218 | 357 | IPR027806 | - | |
| Ecan3g01795 | 413 | PANTHER | UNCHARACTERIZED | 87 | 403 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01795 | K23222 | nuclease HARBI1 [EC:3.1.-.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:29136740 | Ecan4g03737 | Ecan-Chr4:44889961 | dispersed | |
| Ecan | Ecan-Chr3:29136740 | Ecan5g00047 | Ecan-Chr5:433956 | transposed |