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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01811 ATGGCAGATTCTAAGCAATTGTTCAAACAACGTTCCTGGTCACCTGACATCCAACGGGACATCGAGTGGCAAAAGCTTAAGATCAAACAACAACGTCGTTACCAACACCGTCGTAGTAAAAGTATTGATGCTTCTACTAACGTTGACGTTACGGATGATGATGTAAAGGAGCTCAAAGCATGTTTTGATTTGGGTTTTAGTTTTGATACTTGTGACAATTTGGACCCGAAACTAACACAAGTTTTCCCTGCTTTGGAGTTATACGCCGCTGTTAACCGGCAATATAATAGTAGAATCTTGTCACGATCTTCTTCATTAAGTTCTGATTCTTCTTCAAGTTCTTCGAGTGTTACTACCACAATCATTGATCCAAATGATGATCTTCTAAAAAGGAAGATGAAATTGAGACAATGGGCGCGATTGGTTTCATGTTCCATATTAGAAACTTGTTCGCGTAATGGGAAGGATATCATCAAAGCGGAAACGGCAACATCACCACTCAAACGGGATGAAGAAACGGAAAGCTAA 528 39.96 MADSKQLFKQRSWSPDIQRDIEWQKLKIKQQRRYQHRRSKSIDASTNVDVTDDDVKELKACFDLGFSFDTCDNLDPKLTQVFPALELYAAVNRQYNSRILSRSSSLSSDSSSSSSSVTTTIIDPNDDLLKRKMKLRQWARLVSCSILETCSRNGKDIIKAETATSPLKRDEETES 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01811 175 PANTHER OSJNBA0071G03.3 PROTEIN 5 147 - -
Ecan3g01811 175 Pfam Protein of unknown function (DUF1685) 50 109 IPR012881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01811 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84749 Ecan3g01811 Ecan5g01365
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29258234 Ecan1g04806 Ecan-Chr1:59332107 dispersed
Ecan Ecan-Chr3:29258234 Ecan5g01365 Ecan-Chr5:26997480 wgd