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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01829 ATGGCTGAAGAAACAGGCACCAGCGGATGCGAAAGCGCGACAATATCGGTCTCAAATACACACGACAAATGCAGTGCTAAAGATAATGCTGATCATGTTACTACAAGTTATAAAAGAAGAAGAGTTGTTGTTTCTAAAGATGAAGATCATCATGAGAATACATTAAAGGTTTCCAAACATAAATTTGAAATGAATTCCCACGAAAATCCAACAAGTACTTCTCATGATCATGTAATTTCGTCGTGTTTATGCTCGGCTAATAAACATGATTCCATTCCAGATCTTATAATCAAGGCTAAGTGTATACCCAAAAGCGGAATTTTCATTTCACTTAACAAAAGTTTCAGAGACGTGTCTAGAACAAGTAGTACTATGAGATGTTTGGAATCAGAAGAAATGGCGGACGCAACGAATGAGGCGGCCACTTCATGCCGGAAACCTTCACCAGTTGTAGTGGCAAAAATGCCGTCTGCCGAAGAGCTTGAGGAGTTTTTTGCCAAAGCGGAAAAATATGAGCAAAAACGTTTTGCAGATAAGTACAACTTTGATATTGTGAAAGATGTCCCGATAGAAGGAAGGTACCAATGGATAAAGTTGAAGCCATAA 606 38.78 MAEETGTSGCESATISVSNTHDKCSAKDNADHVTTSYKRRRVVVSKDEDHHENTLKVSKHKFEMNSHENPTSTSHDHVISSCLCSANKHDSIPDLIIKAKCIPKSGIFISLNKSFRDVSRTSSTMRCLESEEMADATNEAATSCRKPSPVVVAKMPSAEELEEFFAKAEKYEQKRFADKYNFDIVKDVPIEGRYQWIKLKP 201
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01829 201 PIRSF CKI-KRP-plant 2 201 IPR044275 GO:0004861(InterPro)|GO:0045736(InterPro)|GO:0051726(InterPro)
Ecan3g01829 201 Gene3D p27 151 201 IPR044898 -
Ecan3g01829 201 Pfam Cyclin-dependent kinase inhibitor 155 198 IPR003175 GO:0004861(InterPro)|GO:0005634(InterPro)|GO:0051726(InterPro)
Ecan3g01829 201 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 40 201 IPR044275 GO:0004861(InterPro)|GO:0045736(InterPro)|GO:0051726(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01829 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29350037 Ecan4g02488 Ecan-Chr4:34968238 dispersed
Ecan Ecan-Chr2:34122698 Ecan3g01829 Ecan-Chr3:29350037 wgd
Ecan Ecan-Chr3:29350037 Ecan4g02487 Ecan-Chr4:34968238 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Ecan8g03462 . 3 1009 Core Cell Cycle gene family AT3G12280 66.016 0.0 1338.0
Ecan8g03463 . 3 1009 Core Cell Cycle gene family AT3G12280 66.276 0.0 1343.0
Ecan8g01882 . 184 361 Core Cell Cycle gene family AT1G76310 24.103 9.11e-06 45.8
Ecan8g01883 . 184 361 Core Cell Cycle gene family AT1G76310 24.103 9.11e-06 45.8
Ecan8g03884 ACH 76 244 Core Cell Cycle gene family AT5G27620 24.737 2.03e-06 48.1
Ecan8g03728 . 18 363 Core Cell Cycle gene family AT5G10270 51.009 1.06e-118 359.0
Ecan8g00309 ACH 10 352 Core Cell Cycle gene family AT5G67260 44.505 4.64e-89 271.0
Ecan8g01653 . 1 460 Core Cell Cycle gene family AT1G44110 58.025 0.0 547.0
Ecan8g03685 . 13 418 Core Cell Cycle gene family AT5G25380 47.845 7.00e-127 374.0
Ecan8g00672 ACH 12 428 Core Cell Cycle gene family AT2G17620 57.647 5.75e-153 438.0
Ecan8g00673 . 12 428 Core Cell Cycle gene family AT2G17620 57.647 8.91e-151 432.0
Ecan8g00674 ACH 14 386 Core Cell Cycle gene family AT1G20610 52.52 7.66e-128 372.0
Ecan8g01413 ACH 80 336 Core Cell Cycle gene family AT2G22490 52.107 4.44e-76 236.0
Ecan8g01462 . 4 430 Core Cell Cycle gene family AT1G76310 58.237 2.45e-166 473.0
Ecan1g02048 . 11 315 Core Cell Cycle gene family AT1G20930 85.902 0.0 556.0
Ecan8g02048 . 18 357 Core Cell Cycle gene family AT5G10270 45.614 1.65e-98 310.0
Ecan8g01744 . 2 321 Core Cell Cycle gene family AT4G37630 33.333 8.31e-43 148.0
Ecan8g01743 . 2 312 Core Cell Cycle gene family AT4G37630 33.542 9.18e-43 147.0
Ecan8g02274 . 18 363 Core Cell Cycle gene family AT5G10270 51.873 7.22e-118 357.0
Ecan9g00058 . 62 264 Core Cell Cycle gene family AT5G02110 32.536 2.14e-31 117.0
Ecan9g00240 . 10 313 Core Cell Cycle gene family AT1G18040 34.202 3.79e-50 169.0
Ecan9g00265 . 9 291 Core Cell Cycle gene family AT1G73690 33.681 1.16e-51 174.0
Ecan9g00275 . 10 302 Core Cell Cycle gene family AT1G66750 33.779 2.33e-53 177.0
Ecan9g00313 . 1 294 Core Cell Cycle gene family AT3G48750 38.255 1.21e-63 202.0
Ecan9g00643 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00635 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00642 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00633 ACH 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00640 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00638 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00639 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00636 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00634 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00641 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g00637 . 55 241 Core Cell Cycle gene family AT5G27620 24.49 1.50e-10 58.5
Ecan9g01038 . 2 309 Core Cell Cycle gene family AT3G54180 82.143 0.0 525.0
Ecan9g00085 . 1 436 Core Cell Cycle gene family AT5G06150 50.881 2.26e-142 412.0
Ecan9g01317 . 58 295 Core Cell Cycle gene family AT4G03270 39.583 1.51e-50 166.0
Ecan9g02417 ACH 1 81 Core Cell Cycle gene family AT2G27970 91.358 7.45e-54 160.0
Ecan9g00677 ACH 1 221 Core Cell Cycle gene family AT5G48820 41.379 8.77e-37 126.0
Ecan9g01419 . 10 290 Core Cell Cycle gene family AT3G48750 35.395 1.61e-56 185.0
Ecan9g01895 . 198 459 Core Cell Cycle gene family AT1G44110 53.383 1.41e-90 278.0
Ecan1g04859 ACH 1 220 Core Cell Cycle gene family AT5G48820 42.857 2.73e-44 145.0
Ecan9g01894 . 216 459 Core Cell Cycle gene family AT1G44110 54.724 3.54e-86 262.0
Ecan1g04541 ACH 1 80 Core Cell Cycle gene family AT2G27970 90.244 9.33e-53 157.0
Ecan1g00330 . 37 63 Core Cell Cycle gene family AT5G64960 77.778 7.16e-08 47.0
Ecan1g03043 . 18 470 Core Cell Cycle gene family AT5G63610 77.391 0.0 709.0
Ecan1g03497 . 1 435 Core Cell Cycle gene family AT5G25380 48.185 3.69e-146 424.0
Ecan1g03499 . 1 435 Core Cell Cycle gene family AT5G25380 48.185 3.69e-146 424.0
Ecan1g03498 . 1 435 Core Cell Cycle gene family AT5G25380 48.185 3.69e-146 424.0
Ecan1g02047 . 9 307 Core Cell Cycle gene family AT1G76540 82.609 0.0 536.0
Ecan2g03426 . 19 304 Core Cell Cycle gene family AT1G76540 25.15 3.39e-26 106.0
Ecan2g03427 . 20 304 Core Cell Cycle gene family AT1G76540 25.0 1.52e-26 105.0
Ecan2g00300 . 1 505 Core Cell Cycle gene family AT5G10270 77.395 0.0 766.0
Ecan2g01434 . 2 288 Core Cell Cycle gene family AT3G48750 40.206 7.18e-65 205.0
Ecan2g00654 . 189 459 Core Cell Cycle gene family AT1G44110 58.633 5.59e-113 332.0
Ecan2g00655 . 195 459 Core Cell Cycle gene family AT1G44110 57.463 2.82e-104 309.0
Ecan2g01008 . 20 366 Core Cell Cycle gene family AT5G10270 44.318 1.89e-93 295.0
Ecan2g01439 . 2 289 Core Cell Cycle gene family AT3G48750 39.041 4.25e-65 206.0
Ecan2g01467 . 2 289 Core Cell Cycle gene family AT3G48750 39.041 6.13e-65 205.0
Ecan2g03527 . 18 366 Core Cell Cycle gene family AT5G10270 51.567 2.01e-114 348.0
Ecan2g02485 ACH 9 367 Core Cell Cycle gene family AT5G67260 44.236 6.95e-93 280.0
Ecan2g00344 . 26 348 Core Cell Cycle gene family AT5G10270 46.749 1.39e-100 312.0
Ecan2g00657 . 189 459 Core Cell Cycle gene family AT1G44110 54.545 1.06e-98 295.0
Ecan2g03466 . 21 333 Core Cell Cycle gene family AT5G10270 46.875 3.76e-87 276.0
Ecan2g02939 . 18 286 Core Cell Cycle gene family AT4G34160 46.853 2.20e-80 248.0
Ecan2g03720 . 19 459 Core Cell Cycle gene family AT1G80370 51.549 9.14e-144 417.0
Ecan2g02417 . 176 221 Core Cell Cycle gene family AT5G48820 56.522 3.31e-14 67.0
Ecan2g01311 ACH 76 337 Core Cell Cycle gene family AT2G22490 49.624 1.51e-78 242.0
Ecan2g02929 ACH 1 353 Core Cell Cycle gene family AT5G43080 58.056 7.17e-146 414.0
Ecan3g03392 . 20 307 Core Cell Cycle gene family AT1G76540 35.172 1.87e-55 185.0
Ecan3g03393 . 20 307 Core Cell Cycle gene family AT1G76540 35.172 1.20e-55 185.0
Ecan3g01772 ACH 14 282 Core Cell Cycle gene family AT4G34160 54.804 2.99e-97 292.0
Ecan3g00534 . 1 317 Core Cell Cycle gene family AT5G27620 59.875 8.86e-138 392.0
Ecan3g02232 . 20 243 Core Cell Cycle gene family AT4G03270 30.603 3.17e-23 93.6
Ecan3g01829 . 87 195 Core Cell Cycle gene family AT1G49620 41.818 1.96e-21 85.5
Ecan3g02831 ACH 1 222 Core Cell Cycle gene family AT5G48820 44.444 4.60e-52 166.0
Ecan3g03050 . 12 497 Core Cell Cycle gene family AT1G02970 54.96 0.0 542.0
Ecan3g03049 . 12 490 Core Cell Cycle gene family AT1G02970 55.131 0.0 535.0
Ecan3g00213 . 20 647 Core Cell Cycle gene family AT1G16330 42.405 2.25e-150 446.0
Ecan3g02793 ACH 99 273 Core Cell Cycle gene family AT5G27620 27.027 2.46e-12 63.9
Ecan3g02219 . 183 314 Core Cell Cycle gene family AT5G67260 30.075 1.84e-10 58.2
Ecan4g01371 . 1 294 Core Cell Cycle gene family AT3G48750 85.714 0.0 534.0
Ecan4g01370 . 1 294 Core Cell Cycle gene family AT3G48750 85.714 0.0 534.0
Ecan4g02456 ACH 14 281 Core Cell Cycle gene family AT4G34160 51.02 2.72e-97 292.0
Ecan4g02399 . 42 291 Core Cell Cycle gene family AT5G65420 37.313 8.02e-52 171.0
Ecan4g02398 . 52 282 Core Cell Cycle gene family AT1G70210 40.0 1.23e-45 155.0
Ecan4g02488 . 153 195 Core Cell Cycle gene family AT1G49620 74.419 1.18e-18 78.2
Ecan4g02487 . 153 195 Core Cell Cycle gene family AT1G49620 74.419 1.17e-18 78.2
Ecan1g02963 . 17 372 Core Cell Cycle gene family AT5G64960 44.904 8.28e-94 300.0
Ecan1g02964 . 17 272 Core Cell Cycle gene family AT5G10270 51.953 2.06e-84 273.0
Ecan4g02155 . 12 339 Core Cell Cycle gene family AT1G70210 58.982 6.30e-128 367.0
Ecan4g01737 . 161 376 Core Cell Cycle gene family AT3G11520 29.437 6.52e-23 99.8
Ecan4g02178 . 20 312 Core Cell Cycle gene family AT1G76540 34.576 7.82e-56 185.0
Ecan5g00824 . 216 366 Core Cell Cycle gene family AT1G76310 22.807 8.74e-06 45.8
Ecan5g02156 . 18 363 Core Cell Cycle gene family AT5G10270 51.009 9.59e-119 359.0
Ecan5g02157 . 18 363 Core Cell Cycle gene family AT5G10270 51.009 9.59e-119 359.0
Ecan5g02158 . 18 363 Core Cell Cycle gene family AT5G10270 51.009 9.59e-119 359.0
Ecan5g03075 . 1 434 Core Cell Cycle gene family AT5G06150 51.126 1.64e-147 424.0
Ecan5g03076 . 1 434 Core Cell Cycle gene family AT5G06150 51.016 8.94e-147 422.0
Ecan1g03373 . 1 288 Core Cell Cycle gene family AT3G48750 37.329 1.15e-66 214.0
Ecan1g03372 . 1 288 Core Cell Cycle gene family AT3G48750 37.329 1.03e-66 214.0
Ecan5g00149 . 3 478 Core Cell Cycle gene family AT4G28980 55.509 0.0 529.0
Ecan5g00850 . 18 376 Core Cell Cycle gene family AT5G10270 50.552 3.80e-117 359.0
Ecan1g00475 . 18 361 Core Cell Cycle gene family AT5G10270 53.623 3.09e-119 364.0
Ecan5g00801 . 11 432 Core Cell Cycle gene family AT5G06150 52.804 1.28e-143 414.0
Ecan5g00800 . 30 432 Core Cell Cycle gene family AT5G06150 54.054 1.99e-143 414.0
Ecan1g00476 . 18 361 Core Cell Cycle gene family AT5G10270 53.623 3.09e-119 364.0
Ecan1g00477 . 18 361 Core Cell Cycle gene family AT5G10270 53.623 1.61e-119 365.0
Ecan5g02910 . 2 155 Core Cell Cycle gene family AT4G28980 27.673 1.45e-10 63.2
Ecan5g01090 . 26 325 Core Cell Cycle gene family AT5G10270 48.173 9.85e-83 275.0
Ecan5g01667 . 197 459 Core Cell Cycle gene family AT1G44110 51.673 1.10e-84 259.0
Ecan1g00331 . 1 478 Core Cell Cycle gene family AT5G10270 77.893 0.0 740.0
Ecan5g02294 . 1 294 Core Cell Cycle gene family AT3G48750 36.027 1.34e-68 218.0
Ecan6g02000 . 12 304 Core Cell Cycle gene family AT1G76540 29.773 3.76e-44 152.0
Ecan6g01989 . 14 306 Core Cell Cycle gene family AT1G20930 30.892 4.26e-42 149.0
Ecan1g02518 . 8 302 Core Cell Cycle gene family AT3G54180 26.1 4.96e-14 71.6
Ecan6g03034 . 184 392 Core Cell Cycle gene family AT4G37490 34.061 1.02e-31 121.0
Ecan6g00077 . 1 430 Core Cell Cycle gene family AT1G76310 57.788 6.02e-166 472.0
Ecan6g02207 . 18 357 Core Cell Cycle gene family AT5G10270 46.176 1.14e-101 316.0
Ecan6g00877 ACH 1 220 Core Cell Cycle gene family AT5G48820 38.938 1.67e-35 122.0
Ecan6g00878 ACH 1 220 Core Cell Cycle gene family AT5G48820 38.667 4.35e-35 121.0
Ecan6g03033 . 1 291 Core Cell Cycle gene family AT3G48750 53.488 1.23e-113 328.0
Ecan6g01700 ACH 6 428 Core Cell Cycle gene family AT1G20610 52.093 4.56e-148 426.0
Ecan6g02061 . 176 220 Core Cell Cycle gene family AT5G48820 53.333 2.23e-13 65.5
Ecan6g00307 . 2 289 Core Cell Cycle gene family AT3G48750 38.699 1.99e-62 197.0
Ecan6g01983 . 7 323 Core Cell Cycle gene family AT4G37630 33.533 1.76e-49 166.0
Ecan7g01072 . 18 391 Core Cell Cycle gene family AT5G10270 45.358 3.40e-102 320.0
Ecan7g02708 . 6 391 Core Cell Cycle gene family AT1G18040 74.936 0.0 583.0
Ecan7g00750 ACH 1 355 Core Cell Cycle gene family AT5G43080 51.813 3.74e-133 383.0
Ecan7g01454 ACH 77 331 Core Cell Cycle gene family AT2G22490 43.893 1.43e-66 212.0
Ecan7g00655 . 18 364 Core Cell Cycle gene family AT5G10270 46.705 5.21e-109 335.0
Ecan1g03531 . 14 304 Core Cell Cycle gene family AT1G76540 26.331 4.35e-29 113.0
Ecan8g00177 . 172 377 Core Cell Cycle gene family AT3G11520 31.05 3.25e-22 94.0
Ecan8g03305 . 18 450 Core Cell Cycle gene family AT5G10270 44.518 7.93e-121 367.0
Ecan8g02203 . 20 304 Core Cell Cycle gene family AT1G76540 25.225 1.81e-26 105.0
Ecan8g01518 . 21 409 Core Cell Cycle gene family AT5G10270 41.505 6.96e-99 308.0
Ecan8g03525 . 17 371 Core Cell Cycle gene family AT5G64960 44.231 1.05e-92 296.0