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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01833 ATGGATTCATCCCAAGATCAGATCATCAAAGAAATCCCTTACATCATTCGACTATACAAAGATGGCCGGTTTCAAAGACTTGGTGGCACTGATATCGTTCCACCCGGCCTTGATCCTTCTACTAACGTTCAATCTAAAGACGTTGTTATCTCACATGACACCCCTCTTTCCGTTAGGATTTACATTCCAAAAAATGCAAATCCTGACGAAAAAAAACTACCCCTTTTAATCTATTATCATGGAGGCGGTTTCATAATTGAAACCGCCTCCTCTCCTACATATCATAAATTCCTAAACCTAGTAGCATCTGAATCCAACGTCGTCATAGTCTCGGTGGACTATAGAAAAGCACCAGAGTATCCGGTCCCTACGTGTTTCCATGATGCATGGGAAGCGATCAAGTGGACCATGCAACATGAAAACAGAAAGGGACCGGACTCATGGCTTAACGAGTATCCTGATTATGGAAATATATTTTTGGCAGGCGATAGCGCGGGCGCAACTATCGCCCATCATGTGGCTATCCGGGCCGGGTCGGATAATCCGGGTCGGGTCATAAATCTTAAGGGCATTGTGTTGCTACACCCGTATTTTTGGGGAAAGGATCGGATAGGTTCGGAAGATGAGCACCCATTCAAGGCCGGGCCAGGTGATGTATGGATGATTGCCCATCCAGGAACAAGCGGGTTGGATGACCCGTTGATTAACCCGGATAAGGATCCGAAAGTGTCGGATCTTGGATGCTCCAAGGTACTTGTTTGTGTAGCCGAAAATGATTTATTAAAAGAAAGGGGATGGTATTATAAGGATATTTTGGATAAAAATGGGTGGCAAGGATCCATTGAAGTTATTGAGGATAAAAGTGAGGGTCATGTGTTTTTTCTGTTTAATCCTACTTCAGATAGTGCTGGTATTTTGCGCAAGAGAATCGGTACTTTTATTAATCATGCAGATAATTAA 960 43.44 MDSSQDQIIKEIPYIIRLYKDGRFQRLGGTDIVPPGLDPSTNVQSKDVVISHDTPLSVRIYIPKNANPDEKKLPLLIYYHGGGFIIETASSPTYHKFLNLVASESNVVIVSVDYRKAPEYPVPTCFHDAWEAIKWTMQHENRKGPDSWLNEYPDYGNIFLAGDSAGATIAHHVAIRAGSDNPGRVINLKGIVLLHPYFWGKDRIGSEDEHPFKAGPGDVWMIAHPGTSGLDDPLINPDKDPKVSDLGCSKVLVCVAENDLLKERGWYYKDILDKNGWQGSIEVIEDKSEGHVFFLFNPTSDSAGILRKRIGTFINHADN 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01833 319 SUPERFAMILY alpha-beta-Hydrolases 18 316 IPR029058 -
Ecan3g01833 319 Pfam alpha-beta hydrolase fold 76 294 IPR013094 GO:0016787(InterPro)
Ecan3g01833 319 PANTHER ARYLACETAMIDE DEACETYLASE 15 302 IPR050466 -
Ecan3g01833 319 ProSitePatterns Lipolytic enzymes G-D-X-G family, putative serine active site. 158 170 IPR033140 -
Ecan3g01833 319 Gene3D alpha-beta hydrolase 14 316 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01833 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29384112 Ecan3g01833 Ecan-Chr3:29394022 dispersed
Ecan Ecan-Chr3:29394022 Ecan4g02490 Ecan-Chr4:34986649 dispersed
Ecan Ecan-Chr3:29390276 Ecan3g01833 Ecan-Chr3:29394022 tandem
Ecan Ecan-Chr3:29394022 Ecan3g01834 Ecan-Chr3:29407099 tandem
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Ecan8g00216 . 35 422 Carbohydrate Esterase gene family AT3G02410 65.743 0.0 544.0
Ecan8g00215 . 35 422 Carbohydrate Esterase gene family AT3G02410 65.743 0.0 544.0
Ecan8g00217 . 35 422 Carbohydrate Esterase gene family AT3G02410 59.398 4.66e-164 466.0
Ecan8g00218 . 79 422 Carbohydrate Esterase gene family AT3G02410 68.314 5.04e-180 503.0
Ecan8g01123 . 23 330 Carbohydrate Esterase gene family AT1G68620 40.0 2.85e-72 224.0
Ecan8g03829 ACH 6 375 Carbohydrate Esterase gene family AT4G19420 49.072 4.20e-145 416.0
Ecan1g02124 . 493 617 Carbohydrate Esterase gene family AT5G36210 32.283 3.73e-06 48.5
Ecan8g00127 ACH 59 362 Carbohydrate Esterase gene family AT5G47500 37.143 1.30e-68 216.0
Ecan8g02924 . 26 313 Carbohydrate Esterase gene family AT1G24793 58.276 1.57e-119 345.0
Ecan8g02923 . 26 324 Carbohydrate Esterase gene family AT1G24793 57.475 1.64e-124 358.0
Ecan8g03820 ACH 1 375 Carbohydrate Esterase gene family AT4G19420 53.034 1.13e-152 435.0
Ecan8g01104 . 5 561 Carbohydrate Esterase gene family AT3G10710 53.509 0.0 621.0
Ecan8g03766 . 12 566 Carbohydrate Esterase gene family AT3G05610 48.571 0.0 572.0
Ecan8g04290 ACH 59 213 Carbohydrate Esterase gene family AT3G14310 23.899 2.63e-13 66.2
Ecan8g00892 . 5 561 Carbohydrate Esterase gene family AT3G10710 56.46 0.0 652.0
Ecan9g00921 . 1 343 Carbohydrate Esterase gene family AT3G63010 74.419 0.0 541.0
Ecan9g00073 . 17 427 Carbohydrate Esterase gene family AT3G09410 60.096 0.0 538.0
Ecan9g00990 . 6 571 Carbohydrate Esterase gene family AT4G02330 61.376 0.0 703.0
Ecan9g02638 . 68 729 Carbohydrate Esterase gene family AT5G36210 73.002 0.0 1020.0
Ecan9g02765 . 91 391 Carbohydrate Esterase gene family AT1G05310 55.814 2.43e-124 363.0
Ecan9g02766 . 91 341 Carbohydrate Esterase gene family AT1G05310 57.769 2.60e-104 311.0
Ecan9g01643 . 3 329 Carbohydrate Esterase gene family AT3G48700 47.112 3.10e-101 300.0
Ecan9g02095 . 21 118 Carbohydrate Esterase gene family AT3G16970 26.168 1.68e-06 43.5
Ecan9g02096 . 32 130 Carbohydrate Esterase gene family AT3G16970 26.724 1.01e-06 43.9
Ecan9g02761 . 63 388 Carbohydrate Esterase gene family AT1G05310 46.951 2.71e-103 309.0
Ecan9g02762 . 88 388 Carbohydrate Esterase gene family AT1G05310 50.831 4.92e-112 331.0
Ecan9g03076 ACH 91 388 Carbohydrate Esterase gene family AT1G05310 39.262 1.72e-77 242.0
Ecan1g00871 . 36 547 Carbohydrate Esterase gene family AT5G09760 57.774 0.0 592.0
Ecan1g04306 . 28 317 Carbohydrate Esterase gene family AT5G16080 31.313 8.09e-49 165.0
Ecan1g04307 . 23 256 Carbohydrate Esterase gene family AT1G68620 38.43 1.05e-49 167.0
Ecan1g01394 . 37 536 Carbohydrate Esterase gene family AT5G51490 52.673 0.0 521.0
Ecan1g01392 . 51 218 Carbohydrate Esterase gene family AT1G53830 33.136 2.57e-23 94.7
Ecan1g03300 . 19 362 Carbohydrate Esterase gene family AT5G47500 73.851 0.0 548.0
Ecan1g01390 ACH 51 216 Carbohydrate Esterase gene family AT1G53830 31.138 6.83e-21 87.8
Ecan1g01391 . 51 218 Carbohydrate Esterase gene family AT1G53830 32.544 6.48e-23 93.6
Ecan1g01476 . 8 361 Carbohydrate Esterase gene family AT1G69940 50.7 1.62e-133 384.0
Ecan1g02684 . 38 554 Carbohydrate Esterase gene family AT1G23200 52.741 0.0 526.0
Ecan1g02685 ACH 39 218 Carbohydrate Esterase gene family AT3G14310 24.211 1.61e-14 69.7
Ecan1g03357 . 8 566 Carbohydrate Esterase gene family AT5G49180 44.406 3.63e-177 511.0
Ecan1g02505 . 45 427 Carbohydrate Esterase gene family AT5G15860 62.371 2.07e-178 505.0
Ecan2g03958 . 1 581 Carbohydrate Esterase gene family AT1G53840 51.325 0.0 579.0
Ecan2g03959 . 1 592 Carbohydrate Esterase gene family AT3G14310 61.842 0.0 729.0
Ecan2g00642 . 1 446 Carbohydrate Esterase gene family AT5G14310 64.927 0.0 619.0
Ecan2g01400 . 47 359 Carbohydrate Esterase gene family AT5G07430 33.019 1.11e-51 172.0
Ecan2g01795 . 164 410 Carbohydrate Esterase gene family AT2G26450 35.361 8.94e-36 132.0
Ecan2g01865 . 41 334 Carbohydrate Esterase gene family AT5G16080 34.416 5.95e-49 165.0
Ecan2g01888 . 31 536 Carbohydrate Esterase gene family AT5G51490 51.765 0.0 547.0
Ecan2g03446 . 59 583 Carbohydrate Esterase gene family AT1G53830 39.502 7.18e-122 372.0
Ecan1g01387 ACH 116 221 Carbohydrate Esterase gene family AT1G53830 32.407 2.22e-11 58.2
Ecan1g01388 ACH 59 216 Carbohydrate Esterase gene family AT3G14310 21.519 3.75e-11 58.9
Ecan2g00354 ACH 59 362 Carbohydrate Esterase gene family AT5G47500 38.095 3.15e-71 223.0
Ecan1g01438 . 8 359 Carbohydrate Esterase gene family AT5G61570 49.041 2.52e-109 322.0
Ecan2g02023 . 29 324 Carbohydrate Esterase gene family AT5G16080 36.304 1.75e-56 184.0
Ecan2g01918 . 34 359 Carbohydrate Esterase gene family AT5G61570 51.376 7.50e-108 317.0
Ecan1g00250 . 65 389 Carbohydrate Esterase gene family AT1G05310 69.538 0.0 506.0
Ecan2g01864 . 41 341 Carbohydrate Esterase gene family AT5G16080 34.177 2.44e-50 169.0
Ecan3g03304 . 46 224 Carbohydrate Esterase gene family AT5G53370 26.633 4.69e-10 56.6
Ecan3g03305 . 75 224 Carbohydrate Esterase gene family AT5G53370 28.571 4.59e-11 59.7
Ecan3g00005 ACH 80 380 Carbohydrate Esterase gene family AT5G55590 67.55 2.87e-145 414.0
Ecan3g03297 . 10 511 Carbohydrate Esterase gene family AT2G45220 68.726 0.0 725.0
Ecan3g03301 . 34 224 Carbohydrate Esterase gene family AT5G53370 26.214 1.54e-11 61.2
Ecan3g03303 . 51 220 Carbohydrate Esterase gene family AT1G53830 25.698 1.47e-09 55.1
Ecan3g01297 . 6 416 Carbohydrate Esterase gene family AT5G26670 67.64 0.0 589.0
Ecan3g01830 . 4 324 Carbohydrate Esterase gene family AT3G48690 45.794 7.83e-85 257.0
Ecan3g01832 . 4 324 Carbohydrate Esterase gene family AT3G48690 46.417 1.59e-86 261.0
Ecan3g01376 . 8 570 Carbohydrate Esterase gene family AT3G05610 48.596 0.0 588.0
Ecan3g01834 . 12 320 Carbohydrate Esterase gene family AT3G48690 43.548 1.60e-85 259.0
Ecan3g03169 . 1 588 Carbohydrate Esterase gene family AT2G47030 38.862 1.47e-131 395.0
Ecan3g03296 . 11 511 Carbohydrate Esterase gene family AT2G45220 63.636 0.0 659.0
Ecan3g03302 ACH 51 220 Carbohydrate Esterase gene family AT1G53830 25.806 2.35e-10 57.8
Ecan3g01833 . 1 320 Carbohydrate Esterase gene family AT3G48690 47.059 2.50e-91 273.0
Ecan3g02619 . 6 282 Carbohydrate Esterase gene family AT2G41530 81.949 3.98e-178 491.0
Ecan3g03089 . 50 181 Carbohydrate Esterase gene family AT4G02300 34.848 7.41e-12 62.4
Ecan3g01831 . 4 324 Carbohydrate Esterase gene family AT3G48690 46.106 1.82e-83 253.0
Ecan3g02697 . 52 216 Carbohydrate Esterase gene family AT3G14310 29.518 2.51e-15 72.4
Ecan3g03352 . 23 306 Carbohydrate Esterase gene family AT1G68620 36.184 2.88e-50 168.0
Ecan3g01377 . 7 543 Carbohydrate Esterase gene family AT3G05620 64.771 0.0 713.0
Ecan3g02691 . 1 612 Carbohydrate Esterase gene family AT2G26450 46.9 0.0 575.0
Ecan3g03088 . 33 518 Carbohydrate Esterase gene family AT4G02320 51.619 1.58e-180 518.0
Ecan4g03429 . 18 592 Carbohydrate Esterase gene family AT3G14310 59.272 0.0 687.0
Ecan4g03428 . 5 592 Carbohydrate Esterase gene family AT3G14310 61.745 0.0 714.0
Ecan4g03430 . 1 581 Carbohydrate Esterase gene family AT1G53840 57.581 0.0 676.0
Ecan4g01039 . 28 525 Carbohydrate Esterase gene family AT4G33220 58.869 0.0 627.0
Ecan4g01506 . 19 307 Carbohydrate Esterase gene family AT1G68620 34.967 4.03e-58 189.0
Ecan1g04862 . 30 332 Carbohydrate Esterase gene family AT2G19150 40.85 8.15e-76 235.0
Ecan4g00385 . 2 325 Carbohydrate Esterase gene family AT3G48700 39.577 1.43e-79 244.0
Ecan4g01982 ACH 59 219 Carbohydrate Esterase gene family AT3G14310 25.926 5.83e-18 79.7
Ecan4g01079 . 52 214 Carbohydrate Esterase gene family AT1G25141 29.282 6.28e-07 48.5
Ecan4g01299 . 85 182 Carbohydrate Esterase gene family AT4G02300 33.01 1.22e-08 52.0
Ecan4g02492 . 3 177 Carbohydrate Esterase gene family AT1G49660 52.571 2.54e-62 194.0
Ecan4g02560 . 66 359 Carbohydrate Esterase gene family AT5G07430 42.857 2.55e-87 265.0
Ecan4g03660 . 61 357 Carbohydrate Esterase gene family AT5G47500 49.329 1.18e-103 308.0
Ecan4g02491 . 4 315 Carbohydrate Esterase gene family AT1G19190 44.375 3.34e-84 255.0
Ecan4g02490 . 4 315 Carbohydrate Esterase gene family AT1G19190 44.164 1.49e-91 273.0
Ecan4g00383 . 1 326 Carbohydrate Esterase gene family AT3G48700 38.066 9.58e-79 242.0
Ecan4g00380 . 14 313 Carbohydrate Esterase gene family AT1G19190 43.137 4.75e-76 234.0
Ecan4g00336 . 70 247 Carbohydrate Esterase gene family AT1G53840 37.433 7.79e-29 112.0
Ecan4g00382 . 15 325 Carbohydrate Esterase gene family AT3G48700 40.506 2.63e-66 210.0
Ecan4g01876 . 14 329 Carbohydrate Esterase gene family AT1G68620 53.799 1.40e-119 347.0
Ecan5g02825 . 53 213 Carbohydrate Esterase gene family AT3G14310 26.667 1.40e-18 81.3
Ecan5g02822 ACH 61 213 Carbohydrate Esterase gene family AT3G14310 27.389 1.12e-18 80.9
Ecan5g02824 . 61 213 Carbohydrate Esterase gene family AT3G14310 27.389 1.12e-18 80.9
Ecan5g02823 . 75 226 Carbohydrate Esterase gene family AT5G53370 27.044 2.45e-16 74.7
Ecan5g03299 . 12 511 Carbohydrate Esterase gene family AT2G45220 66.862 0.0 696.0
Ecan5g02430 . 5 389 Carbohydrate Esterase gene family AT4G19420 60.779 0.0 523.0
Ecan5g02428 ACH 6 389 Carbohydrate Esterase gene family AT4G19420 60.622 0.0 527.0
Ecan5g02429 . 6 389 Carbohydrate Esterase gene family AT4G19420 60.622 0.0 527.0
Ecan5g02427 ACH 6 361 Carbohydrate Esterase gene family AT4G19420 59.777 2.20e-168 474.0
Ecan5g02255 . 11 375 Carbohydrate Esterase gene family AT4G19420 52.575 2.90e-146 419.0
Ecan5g01379 . 1 315 Carbohydrate Esterase gene family AT1G19190 41.066 1.33e-77 237.0
Ecan5g02826 . 53 218 Carbohydrate Esterase gene family AT1G53830 29.762 5.67e-17 76.3
Ecan1g01223 . 1 586 Carbohydrate Esterase gene family AT5G53370 60.0 0.0 764.0
Ecan5g01056 . 122 230 Carbohydrate Esterase gene family AT3G63010 35.897 1.16e-16 72.4
Ecan5g02254 . 6 378 Carbohydrate Esterase gene family AT4G19420 51.842 2.07e-145 416.0
Ecan5g03336 . 49 302 Carbohydrate Esterase gene family AT1G68620 34.221 6.50e-45 154.0
Ecan5g03301 . 2 511 Carbohydrate Esterase gene family AT2G45220 60.653 0.0 637.0
Ecan5g03302 ACH 56 220 Carbohydrate Esterase gene family AT1G53830 28.07 1.53e-15 72.8
Ecan5g00821 . 11 314 Carbohydrate Esterase gene family AT1G19190 41.083 8.33e-76 233.0
Ecan5g03202 . 4 320 Carbohydrate Esterase gene family AT3G48690 45.426 3.54e-88 266.0
Ecan6g03661 . 1 598 Carbohydrate Esterase gene family AT3G49220 61.576 0.0 770.0
Ecan6g03508 . 56 511 Carbohydrate Esterase gene family AT2G45220 66.094 0.0 637.0
Ecan6g03503 ACH 59 219 Carbohydrate Esterase gene family AT3G14310 31.515 9.21e-15 70.1
Ecan6g03504 ACH 59 217 Carbohydrate Esterase gene family AT3G14310 27.044 6.63e-18 79.3
Ecan6g03505 ACH 62 221 Carbohydrate Esterase gene family AT1G53830 28.834 4.46e-18 79.7
Ecan6g01281 . 38 551 Carbohydrate Esterase gene family AT5G09760 62.235 0.0 647.0
Ecan6g03587 . 8 402 Carbohydrate Esterase gene family AT5G23870 65.823 0.0 558.0
Ecan6g03470 . 1 359 Carbohydrate Esterase gene family AT5G61570 46.257 4.69e-109 322.0
Ecan6g03662 . 489 709 Carbohydrate Esterase gene family AT5G36210 24.576 1.91e-08 55.8
Ecan6g00239 . 28 118 Carbohydrate Esterase gene family AT3G16970 31.25 3.58e-07 44.7
Ecan6g00240 . 42 118 Carbohydrate Esterase gene family AT3G16970 30.12 5.81e-06 41.6
Ecan1g00248 . 493 695 Carbohydrate Esterase gene family AT5G36210 25.346 1.38e-13 72.8
Ecan1g00247 . 493 695 Carbohydrate Esterase gene family AT5G36210 24.885 8.22e-12 67.0
Ecan1g00246 . 493 656 Carbohydrate Esterase gene family AT5G36210 26.966 8.76e-11 63.5
Ecan1g00249 . 493 583 Carbohydrate Esterase gene family AT5G36210 34.066 1.22e-08 56.2
Ecan1g00243 . 330 709 Carbohydrate Esterase gene family AT5G36210 24.311 1.18e-20 94.7
Ecan6g03128 . 1 511 Carbohydrate Esterase gene family AT2G45220 39.057 1.48e-128 383.0
Ecan6g03469 . 164 370 Carbohydrate Esterase gene family AT2G26450 43.636 4.95e-41 146.0
Ecan6g03502 . 77 594 Carbohydrate Esterase gene family AT3G47400 53.757 0.0 560.0
Ecan6g03509 . 19 273 Carbohydrate Esterase gene family AT2G45220 31.599 3.64e-37 136.0
Ecan6g03510 . 42 255 Carbohydrate Esterase gene family AT3G10720 49.77 1.26e-72 219.0
Ecan6g03511 . 2 511 Carbohydrate Esterase gene family AT2G45220 37.982 1.93e-126 378.0
Ecan6g01891 . 1 342 Carbohydrate Esterase gene family AT5G16080 54.598 1.17e-119 347.0
Ecan6g03468 . 353 571 Carbohydrate Esterase gene family AT5G49180 48.649 5.14e-73 229.0
Ecan1g01966 . 39 547 Carbohydrate Esterase gene family AT2G26440 59.259 0.0 610.0
Ecan7g01099 . 36 224 Carbohydrate Esterase gene family AT5G53370 22.772 8.42e-10 55.5
Ecan7g01100 . 52 216 Carbohydrate Esterase gene family AT1G53830 26.471 5.04e-07 47.4
Ecan7g02612 . 59 219 Carbohydrate Esterase gene family AT3G14310 30.675 2.57e-16 74.3
Ecan7g02633 . 34 518 Carbohydrate Esterase gene family AT4G02320 51.822 0.0 525.0
Ecan7g02632 . 1 571 Carbohydrate Esterase gene family AT4G02330 58.29 0.0 679.0
Ecan7g00830 . 1 325 Carbohydrate Esterase gene family AT3G48700 43.865 1.21e-89 270.0
Ecan7g02523 . 1 343 Carbohydrate Esterase gene family AT3G63010 73.429 0.0 538.0
Ecan7g00225 . 60 587 Carbohydrate Esterase gene family AT1G53830 53.875 0.0 559.0
Ecan1g00818 . 42 127 Carbohydrate Esterase gene family AT1G25141 28.736 2.02e-06 47.0
Ecan7g00226 . 85 592 Carbohydrate Esterase gene family AT3G14310 60.039 0.0 595.0
Ecan7g02631 . 52 571 Carbohydrate Esterase gene family AT4G02330 57.965 0.0 610.0
Ecan7g02692 . 52 565 Carbohydrate Esterase gene family AT5G49180 35.334 5.57e-109 337.0
Ecan8g03540 . 1 460 Carbohydrate Esterase gene family AT3G27320 57.701 0.0 518.0
Ecan8g00331 . 17 415 Carbohydrate Esterase gene family AT3G05910 67.734 0.0 588.0
Ecan8g01314 . 93 207 Carbohydrate Esterase gene family AT5G04960 31.707 2.59e-12 63.9
Ecan8g02103 . 63 247 Carbohydrate Esterase gene family AT1G53840 34.694 2.35e-29 114.0
Ecan8g03153 . 225 566 Carbohydrate Esterase gene family AT5G49180 52.464 3.53e-129 383.0
Ecan8g03154 . 240 566 Carbohydrate Esterase gene family AT5G49180 53.939 6.63e-123 366.0
Ecan8g03800 . 96 511 Carbohydrate Esterase gene family AT2G45220 48.832 1.11e-127 376.0