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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01853 ATGATGATGATGATAAAATCAGTTCCGTATTCCGTTAATTTACCGCCGTTAGTTCCCCCTCCTCCTCCGTCAACGACCATATGCTGTTCGTCAAGAAACAATGGGTATATACCAAAGCTTGAGCCGTTTAGTAGAAGCAAATTTGACAGAATCGTTAAGGATCCTCCCCTCATCCAAAAATCCGAAAATGATTTAGCAGATTATTGTTCAACACTGGAAGGCGATCCATCTTATAGCTGCTGGAGAGCTTATTTTGAGCTCAAAGATTTTGAAAAAGAAGCGCCAAAGGAAGTGGTGGAGAGAGTGATAATAGAATCAGGAGGCGTAAAATCATTGATCGGATGCTTACACGGAATCTCGGAAATCCACAAGGCAAAAAAAGAACTAGACCAAAAGAACGAAACAAACGTCGTCAATGAACTGAAATCGGAGAATACACCATTAGCAGCAACAGCAACAGCTGTTGAAAGTAGACGAGCATGTCCTGTACCAAGCGGATTGCCGAAGAGTAGGGAAGAAATGGAGGAAGAAGAAAAAGGGAGAATGCCCGATTCCCCTTTCACTCGATTGCTTCGGTCTAAAGGAAGGTCCCCTGCTTGGTTCTCCCCTACTCCTGATCACTAA 624 43.43 MMMMIKSVPYSVNLPPLVPPPPPSTTICCSSRNNGYIPKLEPFSRSKFDRIVKDPPLIQKSENDLADYCSTLEGDPSYSCWRAYFELKDFEKEAPKEVVERVIIESGGVKSLIGCLHGISEIHKAKKELDQKNETNVVNELKSENTPLAATATAVESRRACPVPSGLPKSREEMEEEEKGRMPDSPFTRLLRSKGRSPAWFSPTPDH 207
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01853 207 MobiDBLite consensus disorder prediction 169 185 - -
Ecan3g01853 207 MobiDBLite consensus disorder prediction 152 207 - -
Ecan3g01853 207 PANTHER CCG-BINDING PROTEIN 1 24 207 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(InterPro)|GO:0036033(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01853 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84760 Ecan3g01853 Ecan4g02510
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29601012 Ecan4g02510 Ecan-Chr4:35125014 wgd