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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01856 ATGGCAACAGCCTCAGCCACTCTATCTCCAGTCAACTTCACAGTGGTTGCACCCACAAGTAAGTCATCAAACAGAACAACAACCAAAGTGACTTACATCAAAGGCATGAACTCATTTGGTGGGCTTAAAGCCCATAACACCACTGTGGCTGCATTAGGACTTCCTGTTTGCACTGAACAACAATTTGCAAACATTGTTTGCTCATTGAGAAAGAAACCATCATTTAAAAATGGTGGTGGTGCACTAACTTCAACTTGCAGTGCAGTGGCTGAGATTTTCAAGATAGCTGCAATTATGAATGGACTAACACTTGTTGGAGTTGCAGTTGGTTTTGTTCTTTTAAGGATTGAAGCATCTGTTGAAGAAGCTGAGTAA 375 41.33 MATASATLSPVNFTVVAPTSKSSNRTTTKVTYIKGMNSFGGLKAHNTTVAALGLPVCTEQQFANIVCSLRKKPSFKNGGGALTSTCSAVAEIFKIAAIMNGLTLVGVAVGFVLLRIEASVEEAE 124
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01856 124 Hamap Cytochrome b6-f complex subunit 7 [petM]. 88 120 IPR012595 GO:0009512(InterPro)
Ecan3g01856 124 Pfam PetM family of cytochrome b6f complex subunit 7 91 117 IPR012595 GO:0009512(InterPro)
Ecan3g01856 124 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 124 IPR053333 -
Ecan3g01856 124 SUPERFAMILY PetM subunit of the cytochrome b6f complex 89 121 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01856 - -