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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01866 ATGAAATACAATGAGATCTCCCATTTTAGCCACCCTCAACACCGGCTTAAACCAGGATACACCGAGGTCCCATTCAAGTGTGATGGATGCAAGGAAGTCGGTATAGGGTCCAACTACAAATGCAAAACATGCAACTACGACTTACACGTCCATTGTGCCCTCCCGTCCCCTTCCATCATCCATCCTTTCTATACCAAGTGTTCATTCCAATTCCTTGCTAGGCCCCCAGGGCCAATAGCCCGTTATTGCAATGCATGCGAGAAAATAGTGTCAGGCTTTGTTTATCATTGCAAGTTGTGTGGATTTGATCTCCATCCATGTTGTGCCAAGCTTCCAACTATGTTGGATGATGGTGAAGTGAAATTGTATCTGTATAGAAAAGTAGGGTCCTCCTGCCACAGATGTGGCAGAAAAGGACGAAGTTGGAGTTACAGGTCCGCGTGCAAGAAGTACAACTTGCACGTGGCTTGTGTGAAAGAAATGCTAGTTGAGAGTTGGCATGAGATTTATTTTGGTAGGAATAATATTATTGGAGTAAAGGGTAACTCTAGTGGTGACTTGTATGGTCTAACAAGGAATTTTGAGACAAGAATTCCAAGCTTAAAGGGAACATTGGAAAGCTATCATCATAATCATCAAAGCAAAGGGAAAGTGAAGAAGTGTTGTGAAATGGCTGGTTTGGCAATGCAGTTTGTGATATCAGCAGTTCTTGGTGACCCCACCACTCTAATTGCAGGTGTTGTTGGTGCTTTAATGTCTAAATAG 765 43.14 MKYNEISHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCKTCNYDLHVHCALPSPSIIHPFYTKCSFQFLARPPGPIARYCNACEKIVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVKLYLYRKVGSSCHRCGRKGRSWSYRSACKKYNLHVACVKEMLVESWHEIYFGRNNIIGVKGNSSGDLYGLTRNFETRIPSLKGTLESYHHNHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGALMSK 254
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01866 254 Pfam C1 domain 74 109 IPR004146 -
Ecan3g01866 254 Pfam C1 domain 9 53 IPR004146 -
Ecan3g01866 254 SUPERFAMILY Cysteine-rich domain 37 114 IPR046349 -
Ecan3g01866 254 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Ecan3g01866 254 Gene3D - 12 58 - -
Ecan3g01866 254 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 252 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01866 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84763 Ecan3g01866 Ecan4g02518
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29701244 Ecan4g02518 Ecan-Chr4:35193661 wgd