AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01873 ATGGGAGGTCATGTTAGTAAGAGATCTGCAGCATCTACTGCTGCTGCTACGTCTTCGGGTTTGCCTTCGATGTCTTTGAAAGATACCCATCAGATAATATCGGAGTTAAATGCGTATGAGGCTGCGTGTAGATCAGATACGGATTTGCAATCGTTTGATGCTATGTTACATGCTAGGGCTAATAATGTGATCAATACTTTGGCTGTGGGAGTTGAGGTTCGGGCATTGTCGTTTGACACGTTGAAGGAAGTTACGGAATGTTTGTTGGAAATGAATCAAGAAGTTGTGAAGGTGATATTGCATTGTAAGAAAGATATTTGGAAGAATCAAGAATTGTTTGAATTGGTGGAGGAGTATTTTGAGAATAGTCTGCAAACGCTAGATTTCTGTGCTGCATTGGATAAGTGTTTGAAAAGGGTGAGAGATAGTCAGTTGTTGATTCTTGTGGCTTTGCAGCATTTTGATGAGGATGAAGGTGGAGAGGATGATAAGTATGAAAAGACGCTCGAGGATTTGAAGCATTTTAAGGATGCTGGTGATCCGTTCACCGAGGAATTCTTCACGATTTTTCATTCTGTGTATCGACAGCAAATGCTGATGCTTGATAAGTTACAAGCTAAGAAAATGAAGTTGGATAAAAAAGTTAAGTATATTCAAACGTGGAGGAAAGTGTCATCTGTTATCTTTGTGGCTACTTTTGCAGCAGTGTTGATATGTTCTGTAGTGGCGGCTGCTATGGCTGCACCGGCTGTGGCTGCTGCTCTTACTGCCGCATCTGCTATCCCTCTTGGTTCAATGGGGAAGTGGATTAACTCCCTTTTAAAGAACTATGAGAATGCCATTAAAGGACAAAAGGAGATCATTAGCTCGATGCAGGTTGGGGGTTTTGTGGCAATCAGGGACCTTGATACAATTCGGGTTCTTGTTGATAGGCTTAAAATGGATATAGAGGAGATGATGAGGAAGGCTGATCATGCGATCGAGGGAGATGAAATGATGAAAATTGCAATCGAGGAAATAAAGATAAAACTCAATTCGTTTATGAAGAATGTTGATGATTTAGGGTTGCAAGCAGATAACTGCAGCCGTGATGTTAGACGAGCTAGGACTGTCGTCCTGCAAAGGATCATTAAGCCACCACATAATCAGTGA 1152 41.49 MGGHVSKRSAASTAAATSSGLPSMSLKDTHQIISELNAYEAACRSDTDLQSFDAMLHARANNVINTLAVGVEVRALSFDTLKEVTECLLEMNQEVVKVILHCKKDIWKNQELFELVEEYFENSLQTLDFCAALDKCLKRVRDSQLLILVALQHFDEDEGGEDDKYEKTLEDLKHFKDAGDPFTEEFFTIFHSVYRQQMLMLDKLQAKKMKLDKKVKYIQTWRKVSSVIFVATFAAVLICSVVAAAMAAPAVAAALTAASAIPLGSMGKWINSLLKNYENAIKGQKEIISSMQVGGFVAIRDLDTIRVLVDRLKMDIEEMMRKADHAIEGDEMMKIAIEEIKIKLNSFMKNVDDLGLQADNCSRDVRRARTVVLQRIIKPPHNQ 383
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01873 383 Pfam Protein of unknown function (DUF677) 49 376 IPR007749 -
Ecan3g01873 383 PANTHER UPF0496 PROTEIN 3-RELATED 21 378 IPR007749 -
Ecan3g01873 383 MobiDBLite consensus disorder prediction 1 22 - -
Ecan3g01873 383 Coils Coil 302 322 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01873 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29733323 Ecan6g02094 Ecan-Chr6:31999929 dispersed
Ecan Ecan-Chr2:33493824 Ecan3g01873 Ecan-Chr3:29733323 wgd