AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01876 ATGTCGATTTTAGGCCCAAATATGCCAAACGAGGTTGGTCTGCGATTGCTTCTTTGCCCACTTGGTTCCAACGTAGTCCTAAAAACCGCATGCTGTTCTGTGGGAGTTATTATACCTGTTTACTCTACTTTTAAAGCGATCGAGTCACGCAATAGAATTGAGCAACAAAAGTGTCTTGTATACTGGGCAGCATATGGGACTTTTAGCATTGCAGAGACGTTTGCTGACAAAATTATATCATGGGTTCCCCTTTACCATCACATGAAGTTTGCTTTTCTAGTTTGGCTTCAACTTCCCACTACCGATGGTGCTAAACAGCTATACATGAAGCATTTACGTCCTTTTCTTTTGAGGCATCAAATTAAACTTGATCAACTCGTGGCAATCGTGTACAGGGAATCGGGTAAATTTATTAGTGCTCACGAAGGAGAATTTCAGTTTGCAAAGGCAATTGCAATGAAGATTATGATATCAGCGAAACATTTTATCGACGATGGCAGTCAACCTATCCCACCTGTCCCGCCGCCAGAGGGAAGTGCGATGGCAAACCAAAGTGAACAAGGTGAGACCTTGGACTCTAATAATAATGATGACGAGGATGATGATGATGGTTATGTAACCGTTGCTGCAACTTAA 636 42.14 MSILGPNMPNEVGLRLLLCPLGSNVVLKTACCSVGVIIPVYSTFKAIESRNRIEQQKCLVYWAAYGTFSIAETFADKIISWVPLYHHMKFAFLVWLQLPTTDGAKQLYMKHLRPFLLRHQIKLDQLVAIVYRESGKFISAHEGEFQFAKAIAMKIMISAKHFIDDGSQPIPPVPPPEGSAMANQSEQGETLDSNNNDDEDDDDGYVTVAAT 211
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01876 211 PANTHER HVA22-LIKE PROTEINS 35 132 IPR004345 -
Ecan3g01876 211 MobiDBLite consensus disorder prediction 166 211 - -
Ecan3g01876 211 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01876 K17279 receptor expression-enhancing protein 5/6
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
84766 Ecan3g01876 Ecan5g01415
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:29776974 Ecan5g01415 Ecan-Chr5:27582396 wgd