AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01915 | ATGGCGAAACCTTCAGTTGCTTTCTTCGCATTCCTTCTTTTGCTCTTCATTCTTGCTATCTCGGAAATTGCGACTGTGAAGGCAGAACTATGTGAGAAGGCGAGCAAGACGTGGTCTGGAACGTGTCGTTACACGAAACACTGTGACAACCAGTGCAAGTCATGGGAGAGTGCAGCCCATGGAGCTTGCCATGTTCGTAAGAAGAAACACATGTGCTTTTGCTACTTCCACTGCTCCAAAGCCCAGAAGCTGATCGAGCTAGTATTAACGTTGTTTCTGCATGTAATTGGCGCTTCAAGTATACTTGGTCCTAACGGGTGTATCAATTTCGTCATCTATAAAATGCCTAAATATTCATTCGGTTACATTGCAATACTATTTTTCGTTCTTGCTATCTCAGAAATACAGGCAGCAGTTAGTAATGCTCCAAAGTTATGTGAAAAGCCAAGCAAGACGTATTCAGGATTGTGTTTCAACTATGCTTGTGACAAAAAGTGTATGGAATGGGAGGCAGCATTTCACGGTGCTTGTCACACGCGTGAATCCGTAAACAACTGCTATTGCTACTATCACTGTGACAAAGCTCCTCCTGCCACAAAACCAGTTCCCCCTGAGGCAATGGCTCCTTCACCTGATGCTAGCGGTGGTACTGGATCACCACCGCCAGCTAAGAAAATTGTTGAAAAGGTCACAAATTAA | 699 | 44.35 | MAKPSVAFFAFLLLLFILAISEIATVKAELCEKASKTWSGTCRYTKHCDNQCKSWESAAHGACHVRKKKHMCFCYFHCSKAQKLIELVLTLFLHVIGASSILGPNGCINFVIYKMPKYSFGYIAILFFVLAISEIQAAVSNAPKLCEKPSKTYSGLCFNYACDKKCMEWEAAFHGACHTRESVNNCYCYYHCDKAPPATKPVPPEAMAPSPDASGGTGSPPPAKKIVEKVTN | 232 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01915 | 232 | PANTHER | DEFENSIN-LIKE PROTEIN 1 | 1 | 78 | - | GO:0006952(PANTHER) | |
| Ecan3g01915 | 232 | MobiDBLite | consensus disorder prediction | 202 | 232 | - | - | |
| Ecan3g01915 | 232 | Gene3D | - | 30 | 78 | IPR036574 | - | |
| Ecan3g01915 | 232 | SMART | gth-4 | 30 | 78 | IPR003614 | GO:0006952(InterPro) | |
| Ecan3g01915 | 232 | SMART | gth-4 | 145 | 192 | IPR003614 | GO:0006952(InterPro) | |
| Ecan3g01915 | 232 | SUPERFAMILY | Scorpion toxin-like | 144 | 192 | IPR036574 | - | |
| Ecan3g01915 | 232 | Gene3D | - | 141 | 192 | IPR036574 | - | |
| Ecan3g01915 | 232 | Pfam | Gamma-thionin family | 144 | 192 | - | - | |
| Ecan3g01915 | 232 | Pfam | Gamma-thionin family | 30 | 78 | - | - | |
| Ecan3g01915 | 232 | SUPERFAMILY | Scorpion toxin-like | 29 | 78 | IPR036574 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01915 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:30071388 | Ecan3g01915 | Ecan-Chr3:30139425 | proximal | |
| Ecan | Ecan-Chr3:30135791 | Ecan3g01915 | Ecan-Chr3:30139425 | tandem | |
| Ecan | Ecan-Chr3:30139425 | Ecan5g01441 | Ecan-Chr5:27906218 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ecan1g02365 | . | 1 | 77 | Plant Defensins gene family | AT2G02100 | 57.692 | 4.87e-29 | 97.1 | |
| Ecan1g02364 | . | 24 | 77 | Plant Defensins gene family | AT2G02100 | 70.37 | 2.14e-24 | 84.7 | |
| Ecan1g02366 | . | 1 | 77 | Plant Defensins gene family | AT2G02120 | 57.692 | 1.00e-28 | 96.3 | |
| Ecan1g02363 | . | 1 | 77 | Plant Defensins gene family | AT2G02100 | 60.759 | 1.16e-31 | 103.0 | |
| Ecan3g01909 | . | 13 | 78 | Plant Defensins gene family | AT1G19610 | 53.731 | 1.54e-21 | 79.7 | |
| Ecan3g01915 | . | 1 | 78 | Plant Defensins gene family | AT1G19610 | 44.872 | 1.43e-20 | 80.9 | |
| Ecan3g01911 | . | 4 | 78 | Plant Defensins gene family | AT1G19610 | 49.333 | 1.17e-18 | 73.9 | |
| Ecan3g01913 | . | 1 | 78 | Plant Defensins gene family | AT1G19610 | 39.241 | 6.87e-13 | 58.2 | |
| Ecan3g01914 | . | 1 | 78 | Plant Defensins gene family | AT1G19610 | 37.975 | 1.58e-13 | 60.8 | |
| Ecan5g01441 | . | 7 | 78 | Plant Defensins gene family | AT1G19610 | 48.649 | 6.58e-24 | 84.7 | |
| Ecan1g02367 | . | 1 | 77 | Plant Defensins gene family | AT2G02130 | 53.846 | 4.70e-27 | 92.0 |