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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g01937	ATGACGAATAACAAGTTCACGATGCTGATCAAGAATCTCACATTGTCTTTACTCTTGATTTCCCATGTGGTCGTGGTAGTAGCAACCGCCAACGAGTTAGATATCGTCATCCGTCAAGTTACTGGAGACGAAGCAGACCATCGTCACAGGAACAACTTTAACGTGTTCAAAAAAAAGTTTAACAAATTTTACGCGTCACAAGAAGAAGACGAGTACAGGTTTTCTGTTTTCAAGACTAATTGGAATCGCGCAATGCGTAATCAGAAACTTGATCCCTCTGCTACGCATGGGATCACTCAGTTTTCTGATATGAAGATTAAGGAGTTTAAGAGGCATTTGGGGTTGACGTCTCGACGTCTGAGGGTCCCTGCTGATGCGGGCAAGGCACCGATCTTGCCCACGGATGATTTACCGGATGATTTTGATTGGAGAGATCATGGTGCTGTTACTGAAGTCAAAAATCAGGCTTCATGCGGGTCATGCTGGTCGTTTAGTACAACTGGGGCGTTAGAAGGCGCGCATTTCCTTGCTACGGGTAACCTTGAAACTCTTAGCGAGCAGCAACTTGTTGATTGTGATCATGAGTGTGATCCAGAAGTACAAGGATCATGCGATTCAGGGTGTAATGGAGGTCTTATGAATAGTGCTTTCGAATACACTCTCAAAGCTGGCGGGCTTATGAGGGAGAAAGACTATCCATACACAGGAACTGACAATGGTACCTGCAAATTCGATAAAGATAAGGTTGTAGCATCGGTGAGTAACTTCAGTGTTGTATCCCTTGATGAAGACCAGATCGCTGCCAATCTTGTCAAAAACGGTCCTCTTGCAGTGGCGCTTAATGCAGCTTACATGCAGACATATGTTGGGGGAGTGTCATGCCCCTACATATGCTCAAAGAAGTTAAACCATGGTGTGCTATTGGTCGGATATGGAAAGGCTGGATATTCTCCGATAAGAAGGAAAGAAAAGCCATACTGGATCATCAAGAACTCTTGGGGACCGGATTGGGGAGAGAAGGGATATTACAAGATCTGCAAAGGTCGTAATGTGTGTGGTGTCGATTCCATGGTCTCCACAGTCGTTGCAGTTAACTGA	1098	44.99	MTNNKFTMLIKNLTLSLLLISHVVVVVATANELDIVIRQVTGDEADHRHRNNFNVFKKKFNKFYASQEEDEYRFSVFKTNWNRAMRNQKLDPSATHGITQFSDMKIKEFKRHLGLTSRRLRVPADAGKAPILPTDDLPDDFDWRDHGAVTEVKNQASCGSCWSFSTTGALEGAHFLATGNLETLSEQQLVDCDHECDPEVQGSCDSGCNGGLMNSAFEYTLKAGGLMREKDYPYTGTDNGTCKFDKDKVVASVSNFSVVSLDEDQIAANLVKNGPLAVALNAAYMQTYVGGVSCPYICSKKLNHGVLLVGYGKAGYSPIRRKEKPYWIIKNSWGPDWGEKGYYKICKGRNVCGVDSMVSTVVAVN	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g01937	365	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	326	345	IPR025661	-
	Ecan3g01937	365	Pfam	Papain family cysteine protease	137	361	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Ecan3g01937	365	CDD	Peptidase-C1A	138	361	IPR039417	-
	Ecan3g01937	365	SMART	Inhibitor-I29-2	53	109	IPR013201	-
	Ecan3g01937	365	SMART	pept-c1	137	362	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Ecan3g01937	365	Gene3D	Cysteine proteinases	28	363	-	-
	Ecan3g01937	365	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	59	354	IPR013128	GO:0004197(PANTHER)\|GO:0005615(PANTHER)\|GO:0005764(PANTHER)\|GO:0008234(InterPro)\|GO:0051603(PANTHER)
	Ecan3g01937	365	FunFam	Cysteine protease RD19A	35	362	-	-
	Ecan3g01937	365	PRINTS	Papain cysteine protease (C1) family signature	326	332	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Ecan3g01937	365	PRINTS	Papain cysteine protease (C1) family signature	155	170	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Ecan3g01937	365	PRINTS	Papain cysteine protease (C1) family signature	304	314	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Ecan3g01937	365	SUPERFAMILY	Cysteine proteinases	47	361	IPR038765	-
	Ecan3g01937	365	ProSitePatterns	Eukaryotic thiol (cysteine) proteases histidine active site.	302	312	IPR025660	-
	Ecan3g01937	365	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	155	166	IPR000169	-
	Ecan3g01937	365	Pfam	Cathepsin propeptide inhibitor domain (I29)	53	109	IPR013201	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g01937	K01373	cathepsin F [EC:3.4.22.41]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:30388584	Ecan8g01907	Ecan-Chr8:31341605	dispersed
	Ecan	Ecan-Chr7:5977614	Ecan3g01937	Ecan-Chr3:30388584	transposed
	Ecan	Ecan-Chr2:40189885	Ecan3g01937	Ecan-Chr3:30388584	wgd