Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01945 | ATGACTCAAATTAGTCGAAAAATGTGGGGATTTCAACTAAAGAGAACGATCATATGGCGTGTAGCTTTTCTTAGGCGATGTGCTAGATCTTTGTGGCACCAAATTCTTGGTTGTTGGATTGGGAAATCTATCCGATACCGGCAATTGTTACAATCAGGTTCGGGTCATTTGATTCCAACCACGTCTCATCGTCGTAGTCCTCGAGCCGAGGGGACAACGAAGATGAATGACAAGTTTCCGTCAGGAGAAATGACGGAATCTTCTGGTGAAATAACATATTCTAGTGGCTCTGATCATGATCAAGATGTTTCTGATTTGGTGGCTTTGAAGATTACTTTGTTAGGTGATCACCATATTGGCAAAACAAGCTTCTTGGCAAAGTATGTTGGAAAAGAAAAGAATCAAGAAGAAAAACAAGCAACCAAAGGAATGAATCATATGGATAAAACATTGTGTGTTAGAGGAGCCAGGATTTCCTACAGCTTATGGGAAGTGGGTGGTGATGAATTTTGTCCAGATGGCGATTCGAGTGCTTCAATTCCTACAGCTTGTAAAGACTCTGTGGCTATGTTATTCATGTTTGATCTAACGAGTCGTCGTACACTAAATAATGTAATCAATTGGCATCAACAAGCTAGGAATCATAATCAGACGGCGATTCCTGTCATGGTTGGTAGTAAGTTCGACGAATTTGTACAACTTCCGTTAGATTTACAATGGGAGATCGCAAGTCAGGCAAGGGCCTATGCCAAAGCTATAAACGCGACATTGTTCTTCTCAAGTGCTTCTTACAACATAAACGTAAATAAAATATTTAAGTTTGTAACTGCAAAGCTTTTCGACTTGCCATGGACTCTAGAACGTAACCTGACAGTCGGCGAGCCTATTATTGATTTCTAG | 900 | 40.44 | MTQISRKMWGFQLKRTIIWRVAFLRRCARSLWHQILGCWIGKSIRYRQLLQSGSGHLIPTTSHRRSPRAEGTTKMNDKFPSGEMTESSGEITYSSGSDHDQDVSDLVALKITLLGDHHIGKTSFLAKYVGKEKNQEEKQATKGMNHMDKTLCVRGARISYSLWEVGGDEFCPDGDSSASIPTACKDSVAMLFMFDLTSRRTLNNVINWHQQARNHNQTAIPVMVGSKFDEFVQLPLDLQWEIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTVGEPIIDF | 299 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01945 | 299 | Pfam | Ras family | 110 | 278 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Ecan3g01945 | 299 | ProSiteProfiles | small GTPase Rab1 family profile. | 100 | 299 | - | - | |
| Ecan3g01945 | 299 | Gene3D | - | 99 | 288 | IPR027417 | - | |
| Ecan3g01945 | 299 | PANTHER | - | 107 | 298 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Ecan3g01945 | 299 | MobiDBLite | consensus disorder prediction | 57 | 97 | - | - | |
| Ecan3g01945 | 299 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 109 | 291 | IPR027417 | - | |
| Ecan3g01945 | 299 | FunFam | Septum-promoting GTP-binding protein 1 | 99 | 289 | - | - | |
| Ecan3g01945 | 299 | PRINTS | Transforming protein P21 ras signature | 217 | 230 | - | - | |
| Ecan3g01945 | 299 | PRINTS | Transforming protein P21 ras signature | 109 | 130 | - | - | |
| Ecan3g01945 | 299 | PRINTS | Transforming protein P21 ras signature | 151 | 173 | - | - | |
| Ecan3g01945 | 299 | PRINTS | Transforming protein P21 ras signature | 257 | 279 | - | - | |
| Ecan3g01945 | 299 | SMART | rab-sub-5 | 109 | 282 | - | - | |
| Ecan3g01945 | 299 | MobiDBLite | consensus disorder prediction | 78 | 97 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01945 | K07976 | Rab family, other |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:30472289 | Ecan8g02449 | Ecan-Chr8:35931533 | dispersed | |
| Ecan | Ecan-Chr3:30472289 | Ecan2g01004 | Ecan-Chr2:14172830 | transposed |