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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g01977 ATGGCAATAAACAACAACAACAGGGGTGGTGGATCTTGTAATCCGGCAGTTGTAAAGATCGGAATTACATTTTTAGGATTATGTTTAGTGGGTTATTTATTAGGCCCACCTTTATATTGGCATCTTCTTGAAGGCTTAGCCGCCGTCCGCCGCTCTTCCTCCGCCGTCTCCTGCCCTGCCTGTAACTGTGACTGTGATTCTCAGCCATTACTTTCCATTCCTCAAGCACTAAGCAATGGTTCCTTCACAGATTGTGCAAAGCATGATCCTGAAGTAAACGGAGACACAGAAAAGAACTTTGTTGAGCTTCTATCAGAAGAATTGAAGTTACGTGAAGCTGAAGCTTTAGAAAGTCAAAAGCGTGCCGACATGGCACTTCTGGAGGCGAAGAAGCTAACATCTCAATATCAGAAAGAGGCAGACAAATGCAATTCAGGGATGGAAACCTGTGAAGAAGCTCGTGAAAAAGCTGAAGCAGCTTTACTAGCACAAAAACAACAAAGTGAAATGTGGGAATTAAGAGCCCGGCAAAAAGGCTGGAAGGATGGTGGCGCTAAGCCTGTAAACACTGCATGA 576 44.44 MAINNNNRGGGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHLLEGLAAVRRSSSAVSCPACNCDCDSQPLLSIPQALSNGSFTDCAKHDPEVNGDTEKNFVELLSEELKLREAEALESQKRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWELRARQKGWKDGGAKPVNTA 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g01977 191 Coils Coil 110 130 - -
Ecan3g01977 191 PANTHER EXPRESSED PROTEIN 12 187 - -
Ecan3g01977 191 Coils Coil 147 167 - -
Ecan3g01977 191 Pfam Protein of unknown function (DUF1068) 16 182 IPR010471 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g01977 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84791 Ecan3g01977 Ecan5g01514
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:30841195 Ecan4g03058 Ecan-Chr4:39695414 dispersed
Ecan Ecan-Chr3:30841195 Ecan5g01514 Ecan-Chr5:28850583 wgd