Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01984 | ATGGCTTCGAGTTCTGAAATAGGGCTTGCAGCAGCTACAAACATACTAATGGCATTTGTTTTTTTGGTGGCATTTGCTATACTTAGGATTCAGCCGTTAAACGATAGAGTGTATTTTCCGAAATGGTATTTAAAAGGGTTAAGAAACGATCCACTTCAATCGGGTGTGTTTGTGCAGAAGTTTGTCAACTTGGATTTCAGATCATACTTGAGGTTTTTGAACTGGATGCCTGCTGCATTGCACATGCCAGAACCCGAGCTTATTGATCACGCAGGATTGGATTCGGTTGTTTACTTGAGAATTTACTTGACAGGACTTAAAATATTTGTTCCAATTGCATGCCTTGCTTTCGCGGTCTTGGTGCCGGTCAACTGGACTAATCAGACTTTGGAGCAGTCAAAATTAACATATAGTGACATTGACAAGCTTTCAATATCCAACATTCCAACCGGATCAAACAGGTTTTGGACACATATAGTCATGGCTTACGCCTTTACCTTTTGGACATGCTATATTTTGAAAAGAGAGTATGAGATAATTGCGTCAATGAGGTTGCATTTTATTGCATCAGAACAACGAAGGCCTGATCAATTTACTGTGCTCGTGAGAAATGTGCCATCAGACCCTGATGAGACAGTCAGTGAGCTTGTGGAGCACTTTTTTCTTGTCAACCATCCAGATCAGTATTTGTGTCATCAGGTCGTGAGAAATGCAAATGCACTCTCAAAATTGGTTAATGAGAAGAAAACAAAGCAAAATTGGCTTGACTACTATCAACTGAAGTATAATAGAAATAACCATTCAAAAAGGCCATCAATGAAGACTGGTTTTCTTGGCCTGCACGGTAAGAGGGTGGATGCTATTGATTATTATCAATCCGAGGTTGAGAAACTAATGAAAGAGATATGTAAAGAGAGGGAAAAGGTTATTACGAGCTCCAAATGCGTTGCTCCAGCTGCATTTGTCTCTTTTAAATCACGATGGGGTGCTGCGGTTTGTGCACAAACTGAACAATCCAGGAACCCAACTATCTGGTTAACTGAGTGGGCCCCAGAACCCCGTGATGTTTATTGGGATAATCTTGCCATTCCATTTGTTTCACTCACAATTAGAAGACTTATTATCGCCGTGGCCTTTTTCTTCCTGACGTTTTTCTTCATGATCCCAATAGCATTTGTACAGTCACTTGCAAATATTGATGGCATAGTGAAAGCAGCTCCTTTCTTGCAAGGCATTATGGAAGTGAAATTTGTGAAATCTTTCATACAAGGAGTTCTTCCAGGAATCGCTTTGAAGATCTTCCTCATTCTTCTACCTTCAATCTTGATGATGATGTCTAAGTTTGAAGGTTTCACCTCTATATCAGCTCTAGAGAGAAGATCTGCAACAAGATATTATATTTTTCAGTTTATAAATGTCTTTCTTGGGAGCATAATTACAGGGACTGCATTTCAACAGCTAAAAACCTTCATTCACCAGTCTGCAAACACTATCCCAATGACAATTGGTTCATCTATACCAATGAAAGCAACCTTCTTTATAACTTATATCATGGTCGATGGATGGGCTGGAGTTGCTGGTGAGATTCTGAGGTTAAAACCATTAATATTCTATCACTTAAAGAATTTTCTCTTGGTGAAAACCGAAAAGGACAGAGAAGAGGCAATGAATCCTGGAAGTTTGTCTTTCAACACGGGGGAACCTCAAATCCAGCTTTATTTCTTACTTGGCCTTGTTTATGCTGTTATCACCCCGATTCTGCTACCGTTTATAGTAGTTTTCTTCGCCTTGGCTTACTTGGTGTACCGTCATCAGATAATAAATGTGTATAATCAACAGTATGAGAGCGCTGGATCTTTCTGGCCAGATGTACATCGCCGCATCATAACTGCACTAATTGTATCCCAGTTGCTTTTGATGGGTCTTCTTAGCACAAAAGAAGCTGTGAATTCAACCCCATTGCTTATAGTACTCCCTGTGCTCACCATATGGTTCCATAGATTCTGTAAAGGACGGTTTGAACCAGCTTTCATTAGGTACCCTTTACAGGAGGCAATGATCAAAGATACACTAGAGCGCACAAGGGAGCCAGGTCTAAATGTCAAAGTTTATCTAGAAAATGCATACGTTCACCCAGTTTTCAATAATGAAGACAGATGGGATGGGAGTGATGATGGATTTAGTGATGAAGAGAATCCAAAAGAACCTGCCCTGGTCCCCACAAAGCGTCCTTCACGAACAAACACACCAGCACGAAGTCAACGTAGCGAGTCAACACGAACCTTGTTGTGTGTTACGGATGAAAGATCCTGTCCATAA | 2319 | 40.49 | MASSSEIGLAAATNILMAFVFLVAFAILRIQPLNDRVYFPKWYLKGLRNDPLQSGVFVQKFVNLDFRSYLRFLNWMPAALHMPEPELIDHAGLDSVVYLRIYLTGLKIFVPIACLAFAVLVPVNWTNQTLEQSKLTYSDIDKLSISNIPTGSNRFWTHIVMAYAFTFWTCYILKREYEIIASMRLHFIASEQRRPDQFTVLVRNVPSDPDETVSELVEHFFLVNHPDQYLCHQVVRNANALSKLVNEKKTKQNWLDYYQLKYNRNNHSKRPSMKTGFLGLHGKRVDAIDYYQSEVEKLMKEICKEREKVITSSKCVAPAAFVSFKSRWGAAVCAQTEQSRNPTIWLTEWAPEPRDVYWDNLAIPFVSLTIRRLIIAVAFFFLTFFFMIPIAFVQSLANIDGIVKAAPFLQGIMEVKFVKSFIQGVLPGIALKIFLILLPSILMMMSKFEGFTSISALERRSATRYYIFQFINVFLGSIITGTAFQQLKTFIHQSANTIPMTIGSSIPMKATFFITYIMVDGWAGVAGEILRLKPLIFYHLKNFLLVKTEKDREEAMNPGSLSFNTGEPQIQLYFLLGLVYAVITPILLPFIVVFFALAYLVYRHQIINVYNQQYESAGSFWPDVHRRIITALIVSQLLLMGLLSTKEAVNSTPLLIVLPVLTIWFHRFCKGRFEPAFIRYPLQEAMIKDTLERTREPGLNVKVYLENAYVHPVFNNEDRWDGSDDGFSDEENPKEPALVPTKRPSRTNTPARSQRSESTRTLLCVTDERSCP | 772 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01984 | 772 | Pfam | Cytosolic domain of 10TM putative phosphate transporter | 197 | 360 | IPR027815 | - | |
| Ecan3g01984 | 772 | MobiDBLite | consensus disorder prediction | 721 | 772 | - | - | |
| Ecan3g01984 | 772 | Pfam | Late exocytosis, associated with Golgi transport | 9 | 176 | IPR032880 | - | |
| Ecan3g01984 | 772 | MobiDBLite | consensus disorder prediction | 721 | 737 | - | - | |
| Ecan3g01984 | 772 | MobiDBLite | consensus disorder prediction | 742 | 765 | - | - | |
| Ecan3g01984 | 772 | Pfam | Calcium-dependent channel, 7TM region, putative phosphate | 371 | 643 | IPR003864 | GO:0016020(InterPro) | |
| Ecan3g01984 | 772 | PANTHER | PROBABLE MEMBRANE PROTEIN DUF221-RELATED | 8 | 723 | IPR045122 | GO:0005227(PANTHER)|GO:0005227(InterPro)|GO:0005886(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01984 | K21989 | calcium permeable stress-gated cation channel |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:30896524 | Ecan3g04101 | Ecan-Chr3:47449600 | dispersed | |
| Ecan | Ecan-Chr3:30896524 | Ecan4g00602 | Ecan-Chr4:11038205 | transposed |