Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g01990 | ATGATTAAACACATACTAAACAAGCTTCCAAAAAAATCATCTTCTAAATCATCACATAATGATGAAGATATAGATTTTGGTGCTATAACTTCATCATCTAGTAAAGTTTCAAGCTCCAGCTCGATTTCGAGTAAATCGAATGATGAAGCGCGTAATTCGAATGTTAAGCCTGGTCAAGGGAAAAAGTCAGGTCCTGTTGTGACCCAAGTGGTGGAAGTAGTAAATCATGATTCTTATATAGCATTGCCTAGTTTTCGGGAGGTATCAAGTTCAGAAAAACAGAATTTGTTTATCAAGAAGTTGAATATGTGTTGTGTAGTGTTTGATTTCAATGACGCTGTTAAGGATTCGAAAAAAAAGGATGTGAAGAAACAGACATTGCTTGAGGTTGTTGATTATGTTTCCTCAGTTAATTCAAAGTTTAATGAAGTTACAATTCAGGAGATCACGAAAATGGTGGCTGCTAATCTATTTAGGTCCTTGCCTAATTTGAATCACGAAAACAAAGTCTTGGATTTGTATGATCAAGAAGATGATGAGTTTTATATGGATCCTTCATGGCCACATCTGCAAGTTGTGTATGAGTTCCTTCTTAGGTTTGTGGCTTCATCGGAGACAGATGCAAAGCTTGCCAAAAGGTATCTTGATCATTCATTCGTGTTGAAGTTGCTTGATCTTTTTGATTCAGAAGATCAAAGAGAAAGGGAGTATCTTAAGACAATCATGCACCGGATATATGGAAAGTTCATGGTGCATCGCCCGTTTATCAGGAAAGCCATCAACAATATCTTCTATCTTTTCATATTTGAAACAGGTAAGCACAATGGGATAGCCGAATTGCTTGAGCTTTTGGGTAGTATAATTAACGGGTTTGCTTTGCCATTGAAGGAAGAACATAAGCTTTTTCTTGCCCATGTTTTGATCCCCCTTCACAAGCCCAGAAGTTTATCGGTTTATCAGCCGCAACTATCATACTGTGTTAGTCAGTTTATTGAAAAAGACTCCAAGTTGGCCGATATGGTGATTCGTGGTTTATTGAAGTATTGGCCTGTAACTAATAGTTCAAAAGAGGTCTTGTATCTAAGTGAATTGGAGGAAATACTTGAAGCTACACGGGCTCCGGAATTTGAGAAGTGTATGGTCCCTTTGTTTCGTCAGATTGGTCATTGCCTAAATAGCTCACATTTTCAGGTTGCAGAACGTGCACTGTTCCTATGGAATAACGAGCATATAAGGAATCTAATAACTCAAAATCGCAAGGTGATTCTGCCCATTATATTCGCCCCCTTGGAGAAAAATACTCAAGGTCATTGGAACCAAGCCGTTCAAAGCCTAACTGTAAATGTCAAAAAACTACTATCAGATGCCGATCAATTATTATTCGCAGATTGCCTGGTCAAGTACCAAGAATATGAAACCAAGGAGAAGGAAAGACTAGCAAAGCGACAGTTGACATGGAGCCGTCTGGATGCCATTGCAGCTTCCAGGAACGAGCCTATGGTCATCTCGAGGTTTGCCTCTTCTGTTACTATCACCACTGTGAATTAA | 1548 | 38.76 | MIKHILNKLPKKSSSKSSHNDEDIDFGAITSSSSKVSSSSSISSKSNDEARNSNVKPGQGKKSGPVVTQVVEVVNHDSYIALPSFREVSSSEKQNLFIKKLNMCCVVFDFNDAVKDSKKKDVKKQTLLEVVDYVSSVNSKFNEVTIQEITKMVAANLFRSLPNLNHENKVLDLYDQEDDEFYMDPSWPHLQVVYEFLLRFVASSETDAKLAKRYLDHSFVLKLLDLFDSEDQREREYLKTIMHRIYGKFMVHRPFIRKAINNIFYLFIFETGKHNGIAELLELLGSIINGFALPLKEEHKLFLAHVLIPLHKPRSLSVYQPQLSYCVSQFIEKDSKLADMVIRGLLKYWPVTNSSKEVLYLSELEEILEATRAPEFEKCMVPLFRQIGHCLNSSHFQVAERALFLWNNEHIRNLITQNRKVILPIIFAPLEKNTQGHWNQAVQSLTVNVKKLLSDADQLLFADCLVKYQEYETKEKERLAKRQLTWSRLDAIAASRNEPMVISRFASSVTITTVN | 515 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g01990 | 515 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 82 | 493 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ecan3g01990 | 515 | SUPERFAMILY | ARM repeat | 94 | 476 | IPR016024 | - | |
| Ecan3g01990 | 515 | Gene3D | - | 89 | 491 | IPR011989 | - | |
| Ecan3g01990 | 515 | PIRSF | PP2A-B56 | 3 | 514 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ecan3g01990 | 515 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 1 | 497 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Ecan3g01990 | 515 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
| Ecan3g01990 | 515 | MobiDBLite | consensus disorder prediction | 24 | 59 | - | - | |
| Ecan3g01990 | 515 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 89 | 492 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g01990 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84794 | Ecan3g01990 | Ecan5g01519 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr2:24169794 | Ecan3g01990 | Ecan-Chr3:30930602 | dispersed | |
| Ecan | Ecan-Chr3:30930602 | Ecan6g02367 | Ecan-Chr6:34126626 | dispersed | |
| Ecan | Ecan-Chr8:34185230 | Ecan3g01990 | Ecan-Chr3:30930602 | transposed | |
| Ecan | Ecan-Chr3:30930602 | Ecan5g01519 | Ecan-Chr5:28948480 | wgd |