AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02003 ATGAAGAGATGCAACAATTTTCAGCATTTTTATCCGTTGACAAGTTTCCAAATTGGGGATTTGCAGTCTTATCTTTCGGAACTTAGCATTTTCTTGGCTCCTGATAGCAAGGAATTATATGTATTGGTGGATAATAGACCATGGTTGGAAGATTTACCCTCATCACGGCCTGCGCATCTATGGCAGTTGATGGTTACCAAGTCAAGGATGTCCCCTTTTGCAAACACAAGAGGGCAGAAAGGAAAGAAAGAGACTACGGATTTTGTTAACAAGAAGGTGGGTTCTAAAGGTTCAAGCCAGTCCCAAAACTTGAGAAAATGGTTCTCGGTGGTTGATGCCGCAACACTATCAAAAAAGAGAGCCTTGCTACCTGTGAAGAAACTCCGTAATTCCTTGCTTGCAAATAGCAAATTGCACAGAACCTTGTTCGGGTTCATTGTCTTTCGAGTGGCATGGAAAGATGTTCGTGGCATCAATTACTTAAATGAGCTTCAGACTGATACTTCTCTTGCTGTAGAGGCTAAATACATGACAAGATGGGAGTTTGATAGCATAGCCCAAGCTGCTAAATGCATAAATACATGGTTTCCAGGAACACCAAATGAACGATTTCTTCTAGGAGAGCATCTCAACTCTATGCTAGGGGATGTGTTCCATGATGCTCCTGGAGAATTTACAGACTGCCATAATACTTATTTTGATGAAAACATCATAAATGCTAGTGCAGAGAAGGAGAATGGATCTCCATGCACTCCTCATTCCAATCTTGGTGAAAATCTAGAAACTTTAGAAGACGAAACAAGTATACCACGTACACCTCCTCCCAAGAGAAGGAAATTAATGAGTCCTTTAGGTATCAACGTTGAGCGAAAATATTTCACACCAATAAAGTCTTATGATAGTGATTGTGATGGAACAGCTGAAGCTACCGAGTACAGGGATGTGTTGCTTTTGTTTCGGTTCAATGACCATGACCTCCCATTCGAATTGCAAGAGATAATAGTATCTGATTTGCGATTGCTTACGTTATTAGAGGCTGGACTTCCATCATGGGTGATTTTCTGTCAGTCTTATCCTGTATTTTCTCATATTTATCGTCCATGGATGTGCCCTCTAGCAAGAGCTCTATATGTGGTAATTTCCGTGGTTACAGTGGTCATTGGTTTCTATGATCTGTACAAAAATGTTCCTGTTCTCAAGGCAACCGCATCCCGTTTGTGTGGGCCACTTTTTGATTGGATAGAAACGTGGGAAATGGTATCAAGGATCAAGTACTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAGGCGGTTATGTGGTTCTTGATGATGACACACACTCTCCGATCATTTGTTTCTGTTGTCACACAACCGTTAGCTGGTCCATTTTGGGATATTCTTGAGGTTCTCCTTCCCGTTTGGAATTTGTTTGTTGAGGCAGGACAATATTTATGCTCGTTCATTTGGATTCTGACAGAAACTTCATGGGACATAGTCCAGAATCTAGCGGAAGTCATACTTATTCCCGTGTGGTCCCTCTTGTCACTTCTTTGGATGATTGTATCGGCCGTGGTATACCCTATATTTTGGTGCCTTTGGGGGATACTCTCTGCTCCAATACGTCTCATTCTTGGTCTATCCGATTTTGTGGGATTTGTCTATAATTACATATATGATTTAGTTGGAGAAATATCGCTTATTGTGAGTGGCATTTTTAAGTTAGCTTCAACTGCTGAGACAACAGTAAGCACGTATGAGGTTTCTATTTGGCGTTCTCTTTGGAGTGACCTCTTCTCCCATGTTTTTCGTGCTGTCCGGAGTATTTTAAATGGATTTGTTGCATTTTTTACAGCTTGCAATAGACATCGATTAAGCATATATAATCATATACAGGAGTTCATTCGAACACTTAATCAGCCATCTCAAAGGTCACAGCCCATGAATTCTACTCATCCACCACAGGGATCTGGAAGTCAAATTCCGCCTGAGGCCGTCGGGGAACGGAAGTGGCCGCCCCGGAGACACTTTAAACAGAGTTGA 2043 41.46 MKRCNNFQHFYPLTSFQIGDLQSYLSELSIFLAPDSKELYVLVDNRPWLEDLPSSRPAHLWQLMVTKSRMSPFANTRGQKGKKETTDFVNKKVGSKGSSQSQNLRKWFSVVDAATLSKKRALLPVKKLRNSLLANSKLHRTLFGFIVFRVAWKDVRGINYLNELQTDTSLAVEAKYMTRWEFDSIAQAAKCINTWFPGTPNERFLLGEHLNSMLGDVFHDAPGEFTDCHNTYFDENIINASAEKENGSPCTPHSNLGENLETLEDETSIPRTPPPKRRKLMSPLGINVERKYFTPIKSYDSDCDGTAEATEYRDVLLLFRFNDHDLPFELQEIIVSDLRLLTLLEAGLPSWVIFCQSYPVFSHIYRPWMCPLARALYVVISVVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTHTLRSFVSVVTQPLAGPFWDILEVLLPVWNLFVEAGQYLCSFIWILTETSWDIVQNLAEVILIPVWSLLSLLWMIVSAVVYPIFWCLWGILSAPIRLILGLSDFVGFVYNYIYDLVGEISLIVSGIFKLASTAETTVSTYEVSIWRSLWSDLFSHVFRAVRSILNGFVAFFTACNRHRLSIYNHIQEFIRTLNQPSQRSQPMNSTHPPQGSGSQIPPEAVGERKWPPRRHFKQS 680
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02003 680 PANTHER OS05G0597400 PROTEIN 299 659 - -
Ecan3g02003 680 MobiDBLite consensus disorder prediction 641 680 - -
Ecan3g02003 680 MobiDBLite consensus disorder prediction 243 276 - -
Ecan3g02003 680 MobiDBLite consensus disorder prediction 641 658 - -
Ecan3g02003 680 MobiDBLite consensus disorder prediction 243 262 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02003 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:31056807 Ecan5g01527 Ecan-Chr5:29015691 dispersed
Ecan Ecan-Chr3:31056807 Ecan4g02672 Ecan-Chr4:36436739 transposed