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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02031 ATGAGGAGCATGAAGAAGAGTCCTAAAGTGGCCGATGAAAGCAAGTTGGAAGAAGAAAATGGAGTTGAATTTCCAACTATGGGTCAACATACAAGACCGGGGTTCTCGAGTGGTCTTTCTCTTATTTACCGCGTAATAAGAGCTCCCCTCTCATCACTTGTATCATGCATATCATTCGATCGCCGTATTAGTGGTGCTACTGATAGAGTTTGGGTATCTGGAGAGCCTTCACGGATGTCCGAGGCTAATCATCTTATGGTCATTGATAGTATGCGCTATGCTATTTTGATGTAA 294 43.2 MRSMKKSPKVADESKLEEENGVEFPTMGQHTRPGFSSGLSLIYRVIRAPLSSLVSCISFDRRISGATDRVWVSGEPSRMSEANHLMVIDSMRYAILM 97
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02031 97 MobiDBLite consensus disorder prediction 1 34 - -
Ecan3g02031 97 PANTHER BNAC03G44900D PROTEIN 1 97 - -
Ecan3g02031 97 MobiDBLite consensus disorder prediction 1 20 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02031 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84801 Ecan3g02031 Ecan4g02650
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:31280131 Ecan4g02650 Ecan-Chr4:36191457 wgd
Ecan Ecan-Chr3:31280131 Ecan5g01555 Ecan-Chr5:29340693 wgd