Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02036 | ATGGGTTGTAAAATCTTAAATTTGCTGCTTTTGATATTCATATCAAATATTGCAGTTTCTTATGCTGAAAGATGTAGAACATATACTTTTTCAAGTAACACAACATACGCATCATGTGTTTCTTTACCTGTTTTAAACTCCCACCTTCACTGGAACTATTACAACACTAATGGAACCGTGGACGTGGCTTTTCGCCACACGGGCTCCACCATGTATCAATGGGTTGCTTGGGCACTTAACATTCGTGGGTCGGGCATGATTAATGCTCAAGCCCTTGTTGCTTTACCAACCCCAAATGGGTCAATTGAAGCTTATACTTCATCCGTAGAAGGGAATGCAACAACTTTGCAACGAAGTGCGTTGAGCTTTGATGTTCCGGCGATCAGGGCTGAGAGAGTTGGTGGTGATGTGATTATTTATGCTACTTTGGTTTTGCCTAATGGGTCAACTAACTTTAACCAAGTTTGGCAAGTGGGTCCGGTTACTAATGGTGTCCCCGCTACTCATGCTTTGGACACGGCTAGCCGGAGTTCTATTGGAATGGTTGACTTTTCAACCAGCCAGACTGGTGCTGGTGGTAGCGTTGACGGCTCACGACAACGCCTGAAAAATACTCACGGAGTATTGTGTGCGATTAGTTGGGGAATATTAATGCCAATCGGAGTTGTAACTGCTAGATATATGATGAAAAAGAAAAAAAGACCTTGGTTTTTTGCAGATGATAAAGTAGAAAAAAAGTTTGGGTTTTACTTCCATGTTACAATACAAACAATCGCCTATGTTCTTGGAGTTGCTGGATGGGCCACTGGCCTCAAGCTTGGTGGTGCCTCGGCTGGATCCACACACAAAGTTCACAGAAATATTGGAATCACCATGTTTGTGTTTGGAACACTTCAGGTTCTTGCTCTGAAAATGAGGCCTAAAGAAACGAGCGAATTCAGAACTTGTTGGAAATTCTGTCACCGGCTTTTTGGATGTTTGGTAATCATATTGAGCTTCAACGTCTTCATAGGACTTGATATCTTGGACCCTATTAAGAAGTGGAAGTCGGCATACATCGGCACAGTTAGCACGATGGCGGCTATTACGAGTATATTAGAAATAGCGACATGGTTAATGTAG | 1122 | 42.51 | MGCKILNLLLLIFISNIAVSYAERCRTYTFSSNTTYASCVSLPVLNSHLHWNYYNTNGTVDVAFRHTGSTMYQWVAWALNIRGSGMINAQALVALPTPNGSIEAYTSSVEGNATTLQRSALSFDVPAIRAERVGGDVIIYATLVLPNGSTNFNQVWQVGPVTNGVPATHALDTASRSSIGMVDFSTSQTGAGGSVDGSRQRLKNTHGVLCAISWGILMPIGVVTARYMMKKKKRPWFFADDKVEKKFGFYFHVTIQTIAYVLGVAGWATGLKLGGASAGSTHKVHRNIGITMFVFGTLQVLALKMRPKETSEFRTCWKFCHRLFGCLVIILSFNVFIGLDILDPIKKWKSAYIGTVSTMAAITSILEIATWLM | 373 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02036 | 373 | ProSiteProfiles | DOMON domain profile. | 45 | 159 | IPR005018 | - | |
| Ecan3g02036 | 373 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 8 | 372 | - | - | |
| Ecan3g02036 | 373 | SMART | 561-7 | 205 | 339 | IPR006593 | - | |
| Ecan3g02036 | 373 | ProSiteProfiles | Cytochrome b561 domain profile. | 170 | 373 | IPR006593 | - | |
| Ecan3g02036 | 373 | Pfam | Protein of unknown function (DUF568) | 86 | 184 | IPR045265 | - | |
| Ecan3g02036 | 373 | Gene3D | - | 160 | 373 | - | - | |
| Ecan3g02036 | 373 | CDD | DOMON-CIL1-like | 36 | 186 | IPR045265 | - | |
| Ecan3g02036 | 373 | PIRSF | UCP037471 | 1 | 373 | IPR017214 | - | |
| Ecan3g02036 | 373 | CDD | Cyt-b561-FRRS1-like | 168 | 368 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02036 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84802 | Ecan3g02036 | Ecan4g02642 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:31304773 | Ecan4g02642 | Ecan-Chr4:36142020 | dispersed | |
| Ecan | Ecan-Chr3:31304773 | Ecan3g02037 | Ecan-Chr3:31317642 | tandem | |
| Ecan | Ecan-Chr3:31304773 | Ecan4g02639 | Ecan-Chr4:36132097 | wgd | |
| Ecan | Ecan-Chr3:31304773 | Ecan5g01564 | Ecan-Chr5:29389773 | wgd |