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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02038 ATGGCTATGGTTTTAAGTTCTAAAACCATTCTATTCATCTTCACTATTATTATTTCTTTATTCTTCACTACTTCGTCTGCTGAAACATGTAAAAATCATACTTTTACATCCAAAAGGGTCTTCAAATCTTGCAAGGATCTTCCATACCTCCATGCTTATCTCCATTGGACCCTCTATAAATCCTCAAGACTAGTTCATATTGCATTTCGAGCCCAATACGGCCCAAAAGGTTGGGTTGCTTGGGCTATCAATCCAAGATCAACAATTATGACTGGCTCGCAAGCACTGGTTGCTACTCGCGATGCTAAAGGCAGGATGTCGGCTTATACCACGCCGATTATTGGATACAACCCGTCAATGAAACCTGGGAAACTCGAATTCCGTGTTTCAAAGCTCTCGGCGGAGTATGCAAACAAGGAGATGACTATTTTTGCAATTGTTGGCCCACTCAGAAACTTGCCAATTGTCAATATAGTGTGGCAAGTTGGAAGTGTCGATCGAAAAGGTGTCCCTCAAATGCATGAAATGGAGTCGCAAAATCTTCGATCTGCCATGGCAATTGACTTATCGTAA 573 41.54 MAMVLSSKTILFIFTIIISLFFTTSSAETCKNHTFTSKRVFKSCKDLPYLHAYLHWTLYKSSRLVHIAFRAQYGPKGWVAWAINPRSTIMTGSQALVATRDAKGRMSAYTTPIIGYNPSMKPGKLEFRVSKLSAEYANKEMTIFAIVGPLRNLPIVNIVWQVGSVDRKGVPQMHEMESQNLRSAMAIDLS 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02038 190 CDD DOMON-CIL1-like 41 190 IPR045265 -
Ecan3g02038 190 ProSiteProfiles DOMON domain profile. 50 163 IPR005018 -
Ecan3g02038 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 11 189 - -
Ecan3g02038 190 Pfam Protein of unknown function (DUF568) 90 189 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02038 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:31326122 Ecan4g00658 Ecan-Chr4:13826503 dispersed