Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02050	ATGGATTTCTCAGAATCTACAAAAATCGTATACGACAGGATTCAAAAGATCGAACCCGAGAACGTGTCCAAGATTATCGGGTATCTTCTTTTACAGGATCATGGGGAGAGAGAGATGATAAGATTAGCCTTTGGCCCTGATAATTTAATCTACTCCTTGATCAATAAGGCAAAAACCCACCTGAAATTACCTTCTAATACATCCGCTGGTCAACTCCTTTCGCCTCCTAACGCCAATTCCATCCCTGAAATGCCGATACACTTTACACCGTTCTCTCCTTCACACCGGCATTCACCATTGACTATTCAAGTGCCTACCCGTTGTTGTGATCCCCATGATCAACCGGTTGACTATGTTCCTATGGTTTATCCTGCTTCTTATCCAGAAGATTATCGTCTTCACAACCATCTTCGTTTCATGTCATTAGAAGATCAAGTTGAGTCTCTTAACAGCCCGGATTTTTCGTCCAATAATTACCACTCATCTGAGCCCGCATTGGGTCCTAGAGCGAATAGGAGGTCTCCAAGTTTGCCTGAATTCCCTTTCAAAGTTTGCCATTACTTTATTAAGGGGTTTTGTAGACACGGAAGCAACTGTAGGTACTTGCATCCGACCCCTGAAACCTTCTCCCAAATTTTTAGCCCGAGTTTGAGTGACGATGATCACATGTTTTCACCTGGGTCTCTTGATACACTAGAGTTAGAGCTCACTGAGCTCTTGAAATCCAGAAGAGGGTTCCCTGTGTCGATAGCTTCTTTACCAATGATATATTATGAAAAGTTCGGTAAGACACTTCAGGCTGAGGGATATTTAACCGAGAGCCAGAGACATGGCAAAGCTGGTTATAGTTTGACCAAGCTTCTGGCACGTCTTAAGAGCATTTGTCTCATTGATAGGCCTCATGGGCAACATGCAGTCGTTTTGGCTGATGACTTAGCGAAATGCATTGATCATAACGGAGATAGAAATGAACATGGTGGCATTGTAGCCGGTTCTAGGCAGATATATTTGACTTTTCCAGCTGAGAGTACCTTTTCGGAGCGTGATGTTTTCAACTATTTCAGCAAGTTTGGGCCGGTCCATGACGTGAGAATTCCTTGTCAGCAAAAGAGAATGTTTGGATTTGTGACTTTCATGTTTGCGGAAACCGTTAGGCATATTTTAAATAAGGGAAATCCTCATTTTGTTAGTGGTGCTCGTGTTTTGGTCAAACCCTACCGCGAAAAGTGTAAGCTTGATGATAGGAAACATGGAGATACGTTTCATCAACACTGTTTTGATTCCGAATTTGGGCCTCATTCAATGCCCAAGACTGGTGATAATTCAAGGTTCATCAAGAAGCAGTTCGTCGATGAACAACAAGAGCAGGCATTTGAATTTGAGAGGAGACGTTTTTCAGATATGCATTTAGCAGCAGAGGTCAATAACCAATCTCAACGTTTTGGAACCTCACTCGAAGAGTTGATGCATTCAGAAGGCAATGGTCATGCACAACACATGGACTTCCCTTCAACTGAGCGTTTCAATCATCTTCTAGATGTTTTTAACAATGGTGCAACTAGTGAGGAAAAGATTAGGCAGATCAATACTAAATACAAAGAAGAGGGTAGCCAGGGACTGAATCTTCCAGAAAGTCCGTTTGCATCCGCATTAGGAACTGAAATATCAACAGTTATATAG	1680	42.32	MDFSESTKIVYDRIQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIYSLINKAKTHLKLPSNTSAGQLLSPPNANSIPEMPIHFTPFSPSHRHSPLTIQVPTRCCDPHDQPVDYVPMVYPASYPEDYRLHNHLRFMSLEDQVESLNSPDFSSNNYHSSEPALGPRANRRSPSLPEFPFKVCHYFIKGFCRHGSNCRYLHPTPETFSQIFSPSLSDDDHMFSPGSLDTLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDLAKCIDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERDVFNYFSKFGPVHDVRIPCQQKRMFGFVTFMFAETVRHILNKGNPHFVSGARVLVKPYREKCKLDDRKHGDTFHQHCFDSEFGPHSMPKTGDNSRFIKKQFVDEQQEQAFEFERRRFSDMHLAAEVNNQSQRFGTSLEELMHSEGNGHAQHMDFPSTERFNHLLDVFNNGATSEEKIRQINTKYKEEGSQGLNLPESPFASALGTEISTVI	559

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02050	559	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	551	-	-
	Ecan3g02050	559	Pfam	RNA recognition motif	345	392	IPR000504	GO:0003723(InterPro)
	Ecan3g02050	559	SMART	rrm1-1	334	404	IPR000504	GO:0003723(InterPro)
	Ecan3g02050	559	SMART	c3hfinal6	181	205	IPR000571	GO:0046872(InterPro)
	Ecan3g02050	559	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	333	408	IPR000504	GO:0003723(InterPro)
	Ecan3g02050	559	MobiDBLite	consensus disorder prediction	150	172	-	-
	Ecan3g02050	559	ProSiteProfiles	OST-type HTH domain profile.	228	311	IPR025605	-
	Ecan3g02050	559	ProSiteProfiles	Zinc finger C3H1-type profile.	179	206	IPR000571	GO:0046872(InterPro)
	Ecan3g02050	559	SUPERFAMILY	RNA-binding domain, RBD	345	422	IPR035979	GO:0003676(InterPro)
	Ecan3g02050	559	Gene3D	-	339	411	IPR012677	-
	Ecan3g02050	559	MobiDBLite	consensus disorder prediction	150	164	-	-
	Ecan3g02050	559	CDD	RRM-AtC3H46-like	335	404	IPR034365	-
	Ecan3g02050	559	SUPERFAMILY	CCCH zinc finger	182	204	IPR036855	GO:0046872(InterPro)
	Ecan3g02050	559	Gene3D	-	179	247	-	-
	Ecan3g02050	559	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	340	411	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02050	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	84807	Ecan3g02050	Ecan5g01572

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:31406498	Ecan8g02353	Ecan-Chr8:35147838	dispersed
	Ecan	Ecan-Chr3:31406498	Ecan5g01572	Ecan-Chr5:29521893	wgd