Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02054 | ATGGATTCATCTTTCCAAATTGAGCCCACAAACAAAAAACTAAAGCTATTCCATGATCTTGATGATCATAACGATCAAGATTATGCAATTCATGGTGACAATTTTGTGTTACAAAATTTACCTAGAGATGTGCTTTTGGACATACTCATTAGGCTGCCAATATCATGCTTGATTCAGTTCAAGTTGGTATGTCACTCATGGAACTCATTGTCTATGGACCCTGAACTAGCCCGGGTTCACCATGTCGCGATGGCGAAAAACGACCCCATGTTAATGTTCCATTGTGATTACCCAATTCGAAACCAACTCTCCTTTGTTGAATTGTCATCAAATGATCATGATGAAAATATTGTAAGAAAGATATCTATTCCTTTTTGTAACTCCATGCCAGAGTTTAATGTTGTGGGATCATGTAATGGTTTGTTATGTATGTCGGATTCGCTATATAGGGAACCTGTTTACGTGTTTAACCCGTTTTCAAGGGACTATCTTGAGTTACCGAAATCTAAGCAGTTTGATGAACAAGAGGTGATATTTGGGTTCGGGTTTCATCCAGTTACAAAGGAATACAAGGTTGTTAAGATTGTTTATTATAGAAACTCACATGGGCGGAAAAGGGTCATTAGAAACATTAGGAATTACCCGAAATCTGAAGTTCAAGTACTCACTATCTCCAAACAAATGAATAAGAGTTCATGGAGATGCATTGGGAAAATGCCTTATCAGATTGATAGACAATTGAAAGGAGTTGCATTGGTAAATGGGAGACTTCATTGGTTGAGTAGACTTAGTCGGGTTTCTGGGGTTTTAGACCGAGAAATCATCTCATTTGACTTAAAAAGCGAGAAGTTTGAAGTGGTGAAGAAGGCTAGTAATATGGTAGTAATCAACAGCAACCATCATTTGGCCACGGTTCAAGGGTGTTTAGCAGTTGTTGCTCCCTGTGGATATGGGAAGTTGGAGATTTGGGTTATGAAGCAATACGGCATCAAGGAATCTTGGATGAAGGAGTTTGTGATTCATGGAGCGTACCATGTGAAAGCGCCAAACCATGAGTACCAACACGGGATATGGAGGCAAGCATTAAGCAAGAGGATGGTTCGGGTTCTTTGTGTCTTGAAGAATGGAGAAATCTTGTTAGAGTATAGAGGAGGGAGGTTGGTCAAGTATGATCCTAAATGGAAAGAGTTTAAAAATGTTGTGTTCCCTAAAATGCCCAAATTGTGTCAAACAATTGTTCATGTTGGTACACTAAATTGGGTACATAATTAA | 1272 | 38.84 | MDSSFQIEPTNKKLKLFHDLDDHNDQDYAIHGDNFVLQNLPRDVLLDILIRLPISCLIQFKLVCHSWNSLSMDPELARVHHVAMAKNDPMLMFHCDYPIRNQLSFVELSSNDHDENIVRKISIPFCNSMPEFNVVGSCNGLLCMSDSLYREPVYVFNPFSRDYLELPKSKQFDEQEVIFGFGFHPVTKEYKVVKIVYYRNSHGRKRVIRNIRNYPKSEVQVLTISKQMNKSSWRCIGKMPYQIDRQLKGVALVNGRLHWLSRLSRVSGVLDREIISFDLKSEKFEVVKKASNMVVINSNHHLATVQGCLAVVAPCGYGKLEIWVMKQYGIKESWMKEFVIHGAYHVKAPNHEYQHGIWRQALSKRMVRVLCVLKNGEILLEYRGGRLVKYDPKWKEFKNVVFPKMPKLCQTIVHVGTLNWVHN | 423 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02054 | 423 | SUPERFAMILY | F-box domain | 33 | 97 | IPR036047 | GO:0005515(InterPro) | |
| Ecan3g02054 | 423 | Gene3D | - | 33 | 79 | - | - | |
| Ecan3g02054 | 423 | PANTHER | OS02G0783600 PROTEIN | 40 | 340 | IPR052361 | - | |
| Ecan3g02054 | 423 | ProSiteProfiles | F-box domain profile. | 34 | 80 | IPR001810 | GO:0005515(InterPro) | |
| Ecan3g02054 | 423 | Pfam | Domain of unknown function (DUF295) | 104 | 313 | IPR005174 | - | |
| Ecan3g02054 | 423 | Pfam | F-box domain | 37 | 76 | IPR001810 | GO:0005515(InterPro) | |
| Ecan3g02054 | 423 | NCBIfam | F-box protein interaction domain | 136 | 372 | IPR017451 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02054 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84810 | Ecan3g02054 | Ecan4g02625 | |
| 84811 | Ecan3g02054 | Ecan5g01583 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:31453816 | Ecan5g01584 | Ecan-Chr5:29623769 | dispersed | |
| Ecan | Ecan-Chr1:43596026 | Ecan3g02054 | Ecan-Chr3:31453816 | transposed | |
| Ecan | Ecan-Chr4:35384265 | Ecan3g02054 | Ecan-Chr3:31453816 | transposed | |
| Ecan | Ecan-Chr3:31453816 | Ecan4g02625 | Ecan-Chr4:36078356 | wgd |