Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02058 | ATGTCAACGTCCTCGTCTTCTTCGTCACATGACGGTGGAGACGGTGGCAATGGCGGCGGTGGTGGAGGTGAGTTCGATGAGCCACCACATGCTCGTCAGCGTTTCAACTCGGGTGTGTGGCCTGAACCGTTTCTCGAAGCACTTGCTTCACAAATCGCCATTGATTCTGCCCTCACAGATGGTCGCCTTGCTGCTGCTCCTGCTCTTTTTAATATTTTCCAGGTATGTCGAACATGGCGAACGGTATCCCAGTCTGACCTCCTTTGGCAAACCCTGACACGGCGTATATGGCGTCGTAATCACCTCCTCCATCCGACATGGTATGAAGAATACATTTACCGCCATAGAACAACTAGAAACTTCCGTGATAGAAGGTATATCTACAACACCCTCAACTTCCCTCCGAATGATAACAATAATAATAATAACAATAACGAAATTCTCTCCTGCCGCCGCCTTGCACTATCTGATTACCATCTTGCTGCTGGTTTTTCCGATGGGTCTGTTCGCCTATTTCACCTTCCCACGAGGCATCACGTGTCAACCTTCCATCCTCTTCAACGTAACCATCTTGGCCCGTTCTCTCGCACCGTCTGTGGGATCTTTTTTACAGATAACAGGCTTGTATTTGCCTCACATGATGGTGATATTCATGTTGCATCTATCAACGTTCCCGGAGTCACACGGAGGGCTTACTTAGGTGATGTGGTAACTGACGGTGTCCTTGTAGATTTTGCTGGTTGTAACCAGTGGTGGGTCGGTCTTTATGCAGGTGTTCCAAACCGTGCCTTTCATGTACGAAATGGAAATACGGAAGAACTTGTATTCATTGGTGGCACACTGACTGACCCAGACGCAGTAATTGGCTGGCACTTACTCACAGACCTGACTGAGCATGTTGGTCGAATCCGCATAACAAATGATGATCTTGCGGTAGGTTTTACGAGAAGCAGGGTCATTGTATTTGATTTGAGAAGCCAAGTAATTTTAGGAGAGGTTGTAAGGCAGATAAGCGTTGGTGCAGCTGACGCTTATGATGGAGCTCTCGTGTTTGTAAATAGTAGGGGTGTAGCTAATGTACGCCAAGTGGGTAGTTTGCAAGAAATCTGTAGGTTTATGGCTCGTGGTGGGTCGCTTGGGTGTATGAATGGTGGCTATGGTTTTATGTGCATTGGGGGTGGGATTAGAGTTTGGGAATTGAATCATGGAGCGCACTTGTATATTTTAAGAGAACGGATAGGGGATGCAACCGCGCTCATTGCAGATGAACGGTATGTAGCAGCTTGTACCAATGATCACACCATTCATTTATGGGATTTTGGAGCACGTGACTAG | 1335 | 47.27 | MSTSSSSSSHDGGDGGNGGGGGGEFDEPPHARQRFNSGVWPEPFLEALASQIAIDSALTDGRLAAAPALFNIFQVCRTWRTVSQSDLLWQTLTRRIWRRNHLLHPTWYEEYIYRHRTTRNFRDRRYIYNTLNFPPNDNNNNNNNNEILSCRRLALSDYHLAAGFSDGSVRLFHLPTRHHVSTFHPLQRNHLGPFSRTVCGIFFTDNRLVFASHDGDIHVASINVPGVTRRAYLGDVVTDGVLVDFAGCNQWWVGLYAGVPNRAFHVRNGNTEELVFIGGTLTDPDAVIGWHLLTDLTEHVGRIRITNDDLAVGFTRSRVIVFDLRSQVILGEVVRQISVGAADAYDGALVFVNSRGVANVRQVGSLQEICRFMARGGSLGCMNGGYGFMCIGGGIRVWELNHGAHLYILRERIGDATALIADERYVAACTNDHTIHLWDFGARD | 444 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02058 | 444 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 426 | 440 | IPR019775 | - | |
| Ecan3g02058 | 444 | Gene3D | - | 61 | 123 | - | - | |
| Ecan3g02058 | 444 | PANTHER | WD40 REPEAT PROTEIN 12, 37 | 29 | 402 | - | - | |
| Ecan3g02058 | 444 | SUPERFAMILY | F-box domain | 68 | 119 | IPR036047 | GO:0005515(InterPro) | |
| Ecan3g02058 | 444 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Ecan3g02058 | 444 | SUPERFAMILY | WD40 repeat-like | 132 | 440 | IPR036322 | GO:0005515(InterPro) | |
| Ecan3g02058 | 444 | Gene3D | - | 255 | 444 | IPR015943 | GO:0005515(InterPro) | |
| Ecan3g02058 | 444 | Gene3D | - | 127 | 251 | IPR015943 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02058 | - | - |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ecan | None | None | None | TF | SAP |