AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02069 ATGGCGAGTTACAAGAAACCCCGGATTCGAGACGGTGCGGTTCGTAGGTTCCTTTTTGTAGTATCTTTAACTTTGGCTTGTGTTCTTATGTTGTTGTTTTTTGTTGGGATGAATTTAGGCAGTAGTGGTAGTAGTATGTTTGTGGAAGAAACTTCGGTTGAAATCGATAGTGTTAGTGAATTTAACTTTAATCTTAGTAATTTGGTTGAGAGTATTAACCTTCCTAAACATAATTACTTGTCAAAAATGCTGGAGAATAAAAACCAGCTGCCTCCAAGAAACATGGAGTTGTATCCGAGTTTGGCTAAAGACCGCATAGTGATTGTTCTGTATGTTCACAATCGGCCTCAGTATCTTAAGTTAGTGGTGGATAGTCTTTCTTGTGTGTCGGGTATCAATGAAACGTTGTTGATTGTTAGTCATGATGGATACTTTGAAAAGATGAACAAGATTGTGGAGGATATTAAATTCTGTCAAGTAAAACAAGTATTTGCGCCTTACTCACCTCATATTTTTCCAAATAGTTTTCCGGGTGTGTCAGTTAATGATTGTAAAGAGAAAGATGACCCGGTTGAAAAGAATTGTGAAGGGAGTACTGATCAGTATGGGAATCATCGGTCACCTAAGATTGTGTCATTAAAGCATCATTGGTGGTGGATGATGAATACGGTATGGGATGGACTAAAAGAGACAATTGGTCATTCTGGTGATATTCTTTTTATAGAAGAGGATCATTTCATTTTTCCTAACGCATATCACAACTTGAAGATCTTGACGGAATTGAAACCAAAGAAATGCCCCGATTGTTATGCTTCAAATCTTGCTCCAAGTAATGTGAAGTCAAGAGGTGAAGGTTGGGATAGTTTGATAGCCGAGAGAATGGGTAACGTTGGCTACACCTTTAACCGTACAGTCTGGAGGAAAATACATAGAAAGGCTAAAGAGTTTTGTTTCTTTGATGATTATAACTGGGATATAACAATGTGGGTGACTGTCTATCCTTCATTTGGTGGTCCAGTTTACTCTTTGCGTGGACCCAGGGCTAGTGCTGTCCACTTTGGGAAATGTGGGTTGCACCAAGGTCAGGGAGAGAATGCTGCCTGTGTTGATAACGGCATGGTGAAAGTTGACACTGAGGAGATCGATAAGGTTGCCAATGTTAAACCCGAGTGGCATGTACATGTGATCAGTAACCAAGAAGGCTATCAAGCTGGATTTAGAGGGTGGGGAGGTTGGGGAGATAAAAGAGACCATCAGTTGTGCTTGGATTTTGCCAAAATGTATCACACAAGGAGGAAAACGTATTGA 1308 40.06 MASYKKPRIRDGAVRRFLFVVSLTLACVLMLLFFVGMNLGSSGSSMFVEETSVEIDSVSEFNFNLSNLVESINLPKHNYLSKMLENKNQLPPRNMELYPSLAKDRIVIVLYVHNRPQYLKLVVDSLSCVSGINETLLIVSHDGYFEKMNKIVEDIKFCQVKQVFAPYSPHIFPNSFPGVSVNDCKEKDDPVEKNCEGSTDQYGNHRSPKIVSLKHHWWWMMNTVWDGLKETIGHSGDILFIEEDHFIFPNAYHNLKILTELKPKKCPDCYASNLAPSNVKSRGEGWDSLIAERMGNVGYTFNRTVWRKIHRKAKEFCFFDDYNWDITMWVTVYPSFGGPVYSLRGPRASAVHFGKCGLHQGQGENAACVDNGMVKVDTEEIDKVANVKPEWHVHVISNQEGYQAGFRGWGGWGDKRDHQLCLDFAKMYHTRRKTY 435
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02069 435 PANTHER BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II 14 430 IPR007754 GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(InterPro)|GO:0008455(PANTHER)|GO:0009312(InterPro)|GO:0016020(InterPro)
Ecan3g02069 435 Pfam N-acetylglucosaminyltransferase II (MGAT2) 90 421 IPR007754 GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
Ecan3g02069 435 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 432 IPR029044 -
Ecan3g02069 435 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 105 365 IPR029044 -
Ecan3g02069 435 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02069 K00736 alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]