Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02073 | ATGCCGATGTTGCCGGCTCTCACTCTCTCCTTTCTTTTCCTCCTCTGTCTCTCCACCACAATAAATGCCCATAACATCACCCATATCCTCGACAAAAACCCAGAATTTTCAACCTTCAACCACTACCTCACTCTCACTCACCTAGCGGGAGAGATCAACCGTCGTCAGACCATCACGGTCTGCGCGGTTGACAATGCCGCAATGTCCGCTTTGGTTGCCAAAGGCCTGTCACTTGTAACTATAAAAAATGTACTTTCTCTTCATGTCTTTGCTGACTATTTTGGATCAAAAAAGCTTCATCAAGTCACTAAAGGGTCAACCTCCACTGCCACCATGTATCAAGCCACTGGTGAAGCCCCTGGCACCACTGGTTATGTTCATATTACTGATGTTAAAGGTGGTAAAGTTCAATTCACTCCAGAAGACAATCCATCCCAAACCGACGTCGTTTTTGTCAAATCCATCTTAGAAATGCCATACAACATCTCTGTAATCCAAATAAGTTCAATTCTAAACTCGCCAGAAGCCGAAGCACCAACTTCAGCACCAGACCTAAACTTAACATCATTACTACAAAGAGACGGATGCAAATCGTTTTACGATTTATTATCAACATCTGGAGCCATAGGTACATTTTTAAGTACAGTTGACGGGGGAGTAACTGTGTTTTGTCCAAGTGATGATGCCATTACTGCCTTTGCACCAAAATATAAAAACTTAACGGCAGACCAAAAAACGTCTCTGTTATTATACCATGGTGTTCCGGTTTATAATTCAATGGGGATGCTGAGATCAAGTAATGGGTTGATGAACACGTTGGCTACGGAAGGCAAAAATAAGTACGATTTCACCGTGCAAAATGATGGTAATGATGTGAAGTTGAAGACTAAAGTGGTGACTGCAACAATTACAGGTACAGTTGTTGATGATGAACCTGTTGCGGTTTATAAGATTGATAAGGTTTTGATGCCACGTGAGTTGTTTAAGGGTGCAGTGGTGGAGGCGGATGAGCCAGCGCCAACACCTAAGGCCGCAAAAATGAAAAAGAAGGCGACGAAGAAGGGGGATAGCGTGGAAGCGGAAGCACCTGGGCCGGACTCTTTGGATGACTATCATGATGATGATGCAGCGGATCAAAAGGCTAATTCTGGTGAGAGGGTGGTGGCATCAATGGTTTTAGCTTTGGTTCTCGCTGTCACATTCATTTTGTAA | 1212 | 43.73 | MPMLPALTLSFLFLLCLSTTINAHNITHILDKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSALVAKGLSLVTIKNVLSLHVFADYFGSKKLHQVTKGSTSTATMYQATGEAPGTTGYVHITDVKGGKVQFTPEDNPSQTDVVFVKSILEMPYNISVIQISSILNSPEAEAPTSAPDLNLTSLLQRDGCKSFYDLLSTSGAIGTFLSTVDGGVTVFCPSDDAITAFAPKYKNLTADQKTSLLLYHGVPVYNSMGMLRSSNGLMNTLATEGKNKYDFTVQNDGNDVKLKTKVVTATITGTVVDDEPVAVYKIDKVLMPRELFKGAVVEADEPAPTPKAAKMKKKATKKGDSVEAEAPGPDSLDDYHDDDAADQKANSGERVVASMVLALVLAVTFIL | 403 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02073 | 403 | ProSiteProfiles | FAS1-BIgH3 domain profile. | 183 | 322 | IPR000782 | - | |
| Ecan3g02073 | 403 | Pfam | Fasciclin domain | 34 | 117 | IPR000782 | - | |
| Ecan3g02073 | 403 | Pfam | Fasciclin domain | 195 | 324 | IPR000782 | - | |
| Ecan3g02073 | 403 | SUPERFAMILY | FAS1 domain | 29 | 174 | IPR036378 | - | |
| Ecan3g02073 | 403 | ProSiteProfiles | FAS1-BIgH3 domain profile. | 23 | 171 | IPR000782 | - | |
| Ecan3g02073 | 403 | MobiDBLite | consensus disorder prediction | 351 | 379 | - | - | |
| Ecan3g02073 | 403 | MobiDBLite | consensus disorder prediction | 339 | 379 | - | - | |
| Ecan3g02073 | 403 | FunFam | Fasciclin-like arabinogalactan protein 2 | 22 | 164 | - | - | |
| Ecan3g02073 | 403 | SMART | fasc-3 | 59 | 175 | IPR000782 | - | |
| Ecan3g02073 | 403 | SMART | fasc-3 | 221 | 325 | IPR000782 | - | |
| Ecan3g02073 | 403 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 6 | 396 | IPR033254 | GO:0046658(PANTHER) | |
| Ecan3g02073 | 403 | Gene3D | FAS1 domain | 21 | 171 | IPR036378 | - | |
| Ecan3g02073 | 403 | FunFam | Fasciclin-like arabinogalactan protein 10 | 175 | 325 | - | - | |
| Ecan3g02073 | 403 | SUPERFAMILY | FAS1 domain | 190 | 324 | IPR036378 | - | |
| Ecan3g02073 | 403 | Gene3D | FAS1 domain | 193 | 324 | IPR036378 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02073 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84814 | Ecan3g02073 | Ecan5g01593 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:31578791 | Ecan8g00052 | Ecan-Chr8:513086 | dispersed | |
| Ecan | Ecan-Chr2:43985243 | Ecan3g02073 | Ecan-Chr3:31578791 | transposed | |
| Ecan | Ecan-Chr3:31578791 | Ecan5g01593 | Ecan-Chr5:29696338 | wgd |