Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02079 | ATGTTTCATACATTTTTAGCGATTGTTGTTATAATTTCTTTGTTAAAAACTCACGTTGCTGGGATTAGATTTGTGATCGATAGAGAAGAATGTTTGTCTCATAATGTTGATTATGAGGGAGATACGGTTCATGTTTCTTTTGTTGTAATTAAGGCAGAATCGCCATGGCATTTTTCCGAGGACGGTGTTGATCTAGAGATAAAAGGCCCGGATGGAGAGGAGGTGTACAATGTACATGATAAATCTAGCGAGATGCACGAGTTTGTGGCTCAAAAGAAAGGTTTATACCATTTTTGCTTCATAAACAGGTCTCCATATCACGAGACCGTTGACTTTGATGTTCAAGTTGCCCATTTTGGATCCAACGATCAACATGTAAAAGACGAGCATTTTAAGCCATTGTTTGATCAAATAACAAAATTGGAGGAAGCACTTTACAACATTCAGTTTGAACAGCATTGGTTAGAGGCAGAGAACGATCGACAGGCAATTATAAATCAGAAAATGAGTAAGAGAGCAGTCCAGAAGGCTCTAATCGAGTCTGCAGCACTGATTGGAGCCAGCGTCCTGCAGGTCTATCTTCTACAACGTCTGTTTGAGCGAAAAATGGGGTTCATCTAG | 621 | 39.61 | MFHTFLAIVVIISLLKTHVAGIRFVIDREECLSHNVDYEGDTVHVSFVVIKAESPWHFSEDGVDLEIKGPDGEEVYNVHDKSSEMHEFVAQKKGLYHFCFINRSPYHETVDFDVQVAHFGSNDQHVKDEHFKPLFDQITKLEEALYNIQFEQHWLEAENDRQAIINQKMSKRAVQKALIESAALIGASVLQVYLLQRLFERKMGFI | 206 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02079 | 206 | PANTHER | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN | 6 | 200 | IPR015720 | GO:0005783(PANTHER)|GO:0005793(PANTHER)|GO:0005794(PANTHER)|GO:0006886(PANTHER)|GO:0006888(PANTHER)|GO:0007030(PANTHER)|GO:0030134(PANTHER) | |
| Ecan3g02079 | 206 | Pfam | emp24-gp25L-p24 family-GOLD | 28 | 200 | IPR009038 | - | |
| Ecan3g02079 | 206 | ProSiteProfiles | GOLD domain profile. | 29 | 116 | IPR009038 | - | |
| Ecan3g02079 | 206 | SMART | EMP24-GP25L-2 | 21 | 200 | IPR009038 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02079 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84816 | Ecan3g02079 | Ecan5g01597 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:31660731 | Ecan8g00043 | Ecan-Chr8:453831 | dispersed | |
| Ecan | Ecan-Chr3:31660731 | Ecan5g01597 | Ecan-Chr5:29744607 | wgd |