Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02086 | ATGGAGGGGTTAAACTATGTGACATTTAAGGTTCAGAGTGGCTCAATAAACCCTGCTGCTGGTGGTTCATCTAGATTCAAATCTTTCAAGCTTGCATCAGTTCAAATGGACAGTCACAGAACCTGTCTTCCTTGTATTAGAGCTCAGCAGTATGGGACAAAGGATGGGCCTTTAGTTGCTACTGCATCCAGTGATTCAGTAATTGAAGAACTCAAAAGTAAAGATTGGGAAATAGGGGTTCTAAAGGATGAATTAGCTGCAACACAAGGGATTCGGATTAGAAGGCGACCGCCAACAGGACCTCCTTTGCATTATGTTGGACCGTTTGAGTTTCGGTTGCAGAATGAAGGGAATACTCCTAGGAATATCTTAGAGGAAATTGTATGGAACAAGGATGTAGAGGTTACGCAGATGAAAGAGAAATATCCACTATGTTTGCTAAAGAAGGCTCTCGACAATGCACCTTCTTCCAGAGATTTTGTAGGAGCTCTTAAGGGGTCGTATTTACGAACGGGTTTGCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCAAGTAGAGGTGTTCTAAGGGAAGATTTTCATCCTGTTGAGATAGCAAAAGCTTATGAGAAAGGTGGAGCAGCATGCCTAAGTGTTTTGACCGATTCAAAATATTTTCAGGGAAGCTTTGAGAATCTAGAGGCTATAAGGAGTGCAGGAGTCAAGTGCCCTCTTTTGTGCAAAGAGTTCATTGTGGATGCATGGCAGTTGTATTATGCGCGAACAAAGGGTGCTGATGCTGTTCTGTTAATTGCAGCTGTTTTACCAGATCTTGACATCAGATATATGCTTAAGATATGTAAATTGATTGGACTGACGGCCCTCGTTGAGGTCCATGATGAGAATGAAATGGATCGCATGCTAGGAATTGATGGAATTGAACTTATTGGCATCAACAATCGTAACCTTGCAACATTTGAAGTCGATATTAGTAACACAAAGAAGTTGCTTGAAGGTGAGCGTGGAGAGAAGATTCGACAGAAAGACATAATAGTGGTCGGGGAGTCCGGGCTGTTTACTCCTACTGACATTACATATGTACAGGAAGCTGGTGTGAAAGCGATATTGGTCGGTGAGTCGATTGTGAAGCAGAAAGATCCGAGAAAAGGAATTAGTGAACTTTTTGGAAAAGATATATCAGCTTAG | 1188 | 41.92 | MEGLNYVTFKVQSGSINPAAGGSSRFKSFKLASVQMDSHRTCLPCIRAQQYGTKDGPLVATASSDSVIEELKSKDWEIGVLKDELAATQGIRIRRRPPTGPPLHYVGPFEFRLQNEGNTPRNILEEIVWNKDVEVTQMKEKYPLCLLKKALDNAPSSRDFVGALKGSYLRTGLPGLIAEVKKASPSRGVLREDFHPVEIAKAYEKGGAACLSVLTDSKYFQGSFENLEAIRSAGVKCPLLCKEFIVDAWQLYYARTKGADAVLLIAAVLPDLDIRYMLKICKLIGLTALVEVHDENEMDRMLGIDGIELIGINNRNLATFEVDISNTKKLLEGERGEKIRQKDIIVVGESGLFTPTDITYVQEAGVKAILVGESIVKQKDPRKGISELFGKDISA | 395 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02086 | 395 | FunFam | Indole-3-glycerol phosphate synthase chloroplastic | 116 | 394 | - | - | |
| Ecan3g02086 | 395 | SUPERFAMILY | Ribulose-phoshate binding barrel | 131 | 390 | IPR011060 | - | |
| Ecan3g02086 | 395 | PANTHER | TRYPTOPHAN BIOSYNTHESIS PROTEIN | 64 | 391 | IPR045186 | GO:0000162(PANTHER)|GO:0004425(InterPro)|GO:0004425(PANTHER)|GO:0004640(PANTHER) | |
| Ecan3g02086 | 395 | Hamap | Indole-3-glycerol phosphate synthase [trpC]. | 122 | 390 | IPR013798 | GO:0004425(InterPro) | |
| Ecan3g02086 | 395 | Pfam | Indole-3-glycerol phosphate synthase | 124 | 388 | IPR013798 | GO:0004425(InterPro) | |
| Ecan3g02086 | 395 | CDD | IGPS | 160 | 388 | IPR013798 | GO:0004425(InterPro) | |
| Ecan3g02086 | 395 | ProSitePatterns | Indole-3-glycerol phosphate synthase signature. | 176 | 194 | IPR001468 | GO:0004425(InterPro)|GO:0006568(InterPro) | |
| Ecan3g02086 | 395 | Gene3D | Aldolase class I | 116 | 394 | IPR013785 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02086 | K01609 | indole-3-glycerol phosphate synthase [EC:4.1.1.48] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84817 | Ecan3g02086 | Ecan4g02611 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:31695700 | Ecan4g02611 | Ecan-Chr4:35965072 | wgd |