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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02094 ATGTTGAGTTCCAACAACATGCCAGCTTCTAAGATGTTATTACCTTCACCTGGGTTTGGTCTGCCTGATTCAGATCCTATTCTGATGCCTTCACAAGATTCACGGCTTCCTGTGGGTACAATCAGAAGTGAAGTTGGGAGTCAACGAAGTTGTGTTGACCAAATTACTGCAACCCCCCATGAGATCAAGTCACTTACATCTGGTTCTGAGGTTGGAAACTCCACCTTGCAAGGCAAAGCAGCATCTTTTCATGTTCCCTTTTCCATCCCGAAGCCTTCTTCAAACTATAATGATAGGCCGCAACAAGCAATTGGGCCACAAAAAGGTATTATCAAGCTTAACTTAGAATTTGCAAACTCGGATGATTTTCTTATTTGA 378 42.59 MLSSNNMPASKMLLPSPGFGLPDSDPILMPSQDSRLPVGTIRSEVGSQRSCVDQITATPHEIKSLTSGSEVGNSTLQGKAASFHVPFSIPKPSSNYNDRPQQAIGPQKGIIKLNLEFANSDDFLI 125
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02094 125 PANTHER FLOCCULATION PROTEIN (DUF1296) 4 109 IPR044277 GO:0051082(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02094 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:31747195 Ecan5g01604 Ecan-Chr5:29776711 dispersed
Ecan Ecan-Chr3:31747195 Ecan5g01603 Ecan-Chr5:29776711 wgd